Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_H06
         (935 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   2.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect(2) = 2.2
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 490 PXPPPKXPXPXXXGGG 537
           P PPP  P P    GG
Sbjct: 586 PPPPPMGPPPSPLAGG 601



 Score = 20.6 bits (41), Expect(2) = 2.2
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +1

Query: 448 PPPXGXGXFFXXPXPXPPP 504
           PPP G       P   PPP
Sbjct: 533 PPPPGGAVLNIPPQFLPPP 551


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 15/42 (35%), Positives = 15/42 (35%)
 Frame = -1

Query: 572 KXXPXXGGXXPXPPPXXXGXGFXGGGXGXGXKKKXPXPXGGG 447
           K  P  GG    P P        GGG   G K     P GGG
Sbjct: 492 KLQPPPGGRPNAPNPSSAVT--PGGGRAEGDKVTFQIPNGGG 531


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
 Frame = -1

Query: 530 PXXXGXGFXGGGXGXGXKKKX-PXPXGGG 447
           P   G G  GG  G G      P P GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,461
Number of Sequences: 2352
Number of extensions: 5825
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)