Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_H06
(935 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.008
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.066
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 34 0.13
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.13
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.39
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.39
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 33 0.39
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.39
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.68
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.68
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.68
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.68
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.68
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.90
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.7
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.8
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPPP G + P P PP + PGP G PP F P GG P
Sbjct: 287 PPPPPSSG-MWPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMP 334
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPPP G + P P PP + PGP G PP F P GG P
Sbjct: 297 PPPPPSSG-MWPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMP 344
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect(2) = 0.066
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXG 483
GG P PPP G G GGG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG 73
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXG 483
GG P PPP G G GGG G G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCG 130
Score = 21.8 bits (44), Expect(2) = 0.066
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 503 GGGXGXGXKKKXPXPXGGG 447
GGG G G P P GG
Sbjct: 102 GGGCGGGCAPPPPPPACGG 120
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 597 GFPPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGGXGXG 484
G PP G PP G PPP GPG G G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 597 GFPPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGGXGXG 484
G PP G PP G PPP GPG G G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXGXK-KKXPXPXGGG 447
GG P P P G G GGG G G P P GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXG 483
GG P P P G G GGG G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGG 93
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXG 483
GG PPP G G GGG G G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCG 91
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXGXK-KKXPXPXGGG 447
GG P P P G G GGG G G P P GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXG 483
GG P P P G G GGG G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGG 93
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXG 483
GG PPP G G GGG G G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCG 91
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 449 PPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPP + P P P P GG PP GG P G +P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 490 PXPPPKXPXPXXXGGGXGFXPP 555
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 591 PPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGGXG 490
PP PP GG PPP P GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 449 PPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPP + P P P P GG PP GG P G +P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 591 PPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGGXGXGXXKKXPXXXGGGG 445
PP PP GG PPP P GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 490 PXPPPKXPXPXXXGGGXGFXPP 555
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 449 PPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPP + P P P P GG PP GG P G +P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 591 PPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGGXGXGXXKKXPXXXGGGG 445
PP PP GG PPP P GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 490 PXPPPKXPXPXXXGGGXGFXPP 555
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 449 PPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPP + P P P P GG PP GG P G +P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 490 PXPPPKXPXPXXXGGGXGFXPP 555
P PP P P GGG G PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 591 PPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGGXG 490
PP PP GG PPP P GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIF 613
PPPP P P PP P GG PP GG K KKI+
Sbjct: 563 PPPPPLPQNLSGAPPPPPPP----PPMLGGPPPPPPPPGGLMGPASNDAKTIKKIY 614
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 597 GFPPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGG 496
G PP G PP PPP PG F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXKXX 625
PPPP P P PP P GG PP GG P GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 626 PXXPKP 643
P P P
Sbjct: 769 PPPPPP 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPG--PXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXK 619
PPPP G PP PG P GG PP GG P P F
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG---CPPPPPPPPPGGFKG 782
Query: 620 XXPXXPKP 643
P P P
Sbjct: 783 GPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXGXXXXP 579
PPP G P P PPP P GG PP G P
Sbjct: 730 PPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 565 PPXGGGKXXPPPXXPGAXXFXGGXXXGGXKKXPXXPXGGGXF 440
PP GG PPP G GG K P P G F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 597 GFPPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGG 496
G PP G PP PPP PG F GG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXKXX 625
PPPP P P PP P GG PP GG P GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 626 PXXPKP 643
P P P
Sbjct: 769 PPPPPP 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPG--PXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXK 619
PPPP G PP PG P GG PP GG P P F
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG---CPPPPPPPPPGGFKG 782
Query: 620 XXPXXPKP 643
P P P
Sbjct: 783 GPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXGXXXXP 579
PPP G P P PPP P GG PP G P
Sbjct: 730 PPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 565 PPXGGGKXXPPPXXPGAXXFXGGXXXGGXKKXPXXPXGGGXF 440
PP GG PPP G GG K P P G F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 597 GFPPXXGXXXXPPXGGXKXXPPPXXXGPGXFXGG 496
G PP G PP PPP PG F GG
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXKXX 625
PPPP P P PP P GG PP GG P GG P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG--LPPISGGPPPPPPPPGGC 351
Query: 626 PXXPKP 643
P P P
Sbjct: 352 PPPPPP 357
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPG--PXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXK 619
PPPP G PP PG P GG PP GG P P F
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG---CPPPPPPPPPGGFKG 365
Query: 620 XXPXXPKP 643
P P P
Sbjct: 366 GPPPPPPP 373
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXGXXXXP 579
PPP G P P PPP P GG PP G P
Sbjct: 313 PPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 565 PPXGGGKXXPPPXXPGAXXFXGGXXXGGXKKXPXXPXGGGXF 440
PP GG PPP G GG K P P G F
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.68
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 460 GXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXG 564
G G + PPP P P GGG G+ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.68
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 460 GXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXG 564
G G + PPP P P GGG G+ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +3
Query: 408 RGGXGXFFXXXKXPPPXGXXGFFFXPPXXXPPXKXXAPGXXGGGXXXP 551
+GG G F PPP G G + PP PP PG G P
Sbjct: 427 QGGPGGF-----GPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -2
Query: 580 GXXKXPPXGGGKXXPPPXXPGAXXFXGGXXXGGXKKXPXXPXGGGXF 440
G + P GG PPP PGA G G P P G G +
Sbjct: 398 GAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 8/48 (16%)
Frame = +3
Query: 447 PPPXGXXGFFFXPPXXXPPXKXXAP--------GXXGGGXXXPPPXGG 566
PP G F PP PP P G G G PPP GG
Sbjct: 369 PPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGG 416
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 556 GGGKXXPPPXXP-GAXXFXGGXXXGGXKKXPXXPXGGG 446
GGG PPP P G G GG P P GGG
Sbjct: 25 GGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGG 62
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXG 532
PPPP G + P P PP GP G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGPSYAG 70
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/65 (26%), Positives = 19/65 (29%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXKXX 625
PPPP P PP P G PP G P G P +
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 626 PXXPK 640
P P+
Sbjct: 300 PPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/65 (26%), Positives = 19/65 (29%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXKXX 625
PPPP P PP P G PP G P G P +
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 626 PXXPK 640
P P+
Sbjct: 321 PPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/65 (26%), Positives = 19/65 (29%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKPXKKIFXKXX 625
PPPP P PP P G PP G P G P +
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 626 PXXPK 640
P P+
Sbjct: 306 PPPPR 310
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 590 PXFXGXKXXPXXGGXXPXPPPXXXGXGFXGGGXGXG 483
P F P P PPP F GGG G G
Sbjct: 705 PQFVAVAPQPQFVAVAPVPPPVAPAVAFAGGGGGGG 740
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +1
Query: 394 FFSXXGGXXGXFXXXKKXPPPXGXGXFFXXPXPXPP---PKXPXPXXXGGGXGFXPPXXG 564
F GG G PPP G G P P P+ P GGG G P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 412 GXXGXFXXXKKXPPPXGXGXFFXXPXPXPPPKXP 513
G G PPP G G F P P PPP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFM--PPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 412 GXXGXFXXXKKXPPPXGXGXFFXXPXPXPPPKXP 513
G G PPP G G F P P PPP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFM--PPPPPPPPMP 683
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 530 PXXXGXGFXGGGXGXGXKKKXPXPXGGG 447
P G G GGG G ++ P P GGG
Sbjct: 10 PMYGGAGGGGGGPPRGPPQQPPQPQGGG 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,118,866
Number of Sequences: 27780
Number of extensions: 183495
Number of successful extensions: 1346
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -