Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_H01
         (982 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding prote...    73   2e-12
BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding prote...    73   2e-12
AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding prot...    73   2e-12
AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein N...    73   2e-12
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   4.9  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   4.9  

>BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score = 72.9 bits (171), Expect = 2e-12
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 268 MGRRSXNXTKSGKYMNPTDXARXEXXXRXLXXNXRQRQMVXXAVSXXKXPVXILXXLQSI 447
           MGRRS + TKSGK+MNPTD AR E   R L  N +QR MV  AV   K P  I+  ++ +
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 448 DXMEXXVLQPSPXXXXRIXXXKXXRSRQTLDQ 543
           D ME   +Q  P    ++   K  + R+T ++
Sbjct: 61  DEMEFNPVQ-QPQLNEKVLKDKRKKLRETFER 91


>BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score = 72.9 bits (171), Expect = 2e-12
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 268 MGRRSXNXTKSGKYMNPTDXARXEXXXRXLXXNXRQRQMVXXAVSXXKXPVXILXXLQSI 447
           MGRRS + TKSGK+MNPTD AR E   R L  N +QR MV  AV   K P  I+  ++ +
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 448 DXMEXXVLQPSPXXXXRIXXXKXXRSRQTLDQ 543
           D ME   +Q  P    ++   K  + R+T ++
Sbjct: 61  DEMEFNPVQ-QPQLNEKVLKDKRKKLRETFER 91


>AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding protein
           SNP70 protein.
          Length = 641

 Score = 72.9 bits (171), Expect = 2e-12
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 268 MGRRSXNXTKSGKYMNPTDXARXEXXXRXLXXNXRQRQMVXXAVSXXKXPVXILXXLQSI 447
           MGRRS + TKSGK+MNPTD AR E   R L  N +QR MV  AV   K P  I+  ++ +
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 448 DXMEXXVLQPSPXXXXRIXXXKXXRSRQTLDQ 543
           D ME   +Q  P    ++   K  + R+T ++
Sbjct: 61  DEMEFNPVQ-QPQLNEKVLKDKRKKLRETFER 91


>AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein
           NpwBP protein.
          Length = 641

 Score = 72.9 bits (171), Expect = 2e-12
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +1

Query: 268 MGRRSXNXTKSGKYMNPTDXARXEXXXRXLXXNXRQRQMVXXAVSXXKXPVXILXXLQSI 447
           MGRRS + TKSGK+MNPTD AR E   R L  N +QR MV  AV   K P  I+  ++ +
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 448 DXMEXXVLQPSPXXXXRIXXXKXXRSRQTLDQ 543
           D ME   +Q  P    ++   K  + R+T ++
Sbjct: 61  DEMEFNPVQ-QPQLNEKVLKDKRKKLRETFER 91


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
 Frame = +3

Query: 561 SPXXXPPEXAXX-PPRXXXGLXXAAPPPXXXSPPXXXXXXPXIKPGAGRXXXXRXXPPGG 737
           SP   PP      PP    G    APPP    PP      P   P  G        PP  
Sbjct: 424 SPSHPPPAPPLGSPPSSKPGF---APPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSS 480

Query: 738 FPXHXPGXXFXAPXXFXP 791
            P   P   F AP    P
Sbjct: 481 -PSFPPHPDFAAPPPLPP 497


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
 Frame = +3

Query: 561 SPXXXPPEXAXX-PPRXXXGLXXAAPPPXXXSPPXXXXXXPXIKPGAGRXXXXRXXPPGG 737
           SP   PP      PP    G    APPP    PP      P   P  G        PP  
Sbjct: 295 SPSHPPPAPPLGSPPSSKPGF---APPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSS 351

Query: 738 FPXHXPGXXFXAPXXFXP 791
            P   P   F AP    P
Sbjct: 352 -PSFPPHPDFAAPPPLPP 368


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,033,613
Number of Sequences: 237096
Number of extensions: 1218551
Number of successful extensions: 1657
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13102819592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)