Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_G19
(929 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 125 2e-28
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 99 2e-20
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 44 8e-04
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 44 8e-04
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 44 8e-04
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 44 8e-04
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 44 8e-04
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 44 8e-04
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 40 0.017
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 40 0.017
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 40 0.017
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 40 0.017
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 40 0.017
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 40 0.017
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 40 0.017
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 40 0.017
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 40 0.017
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 38 0.052
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 38 0.052
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 38 0.052
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 38 0.052
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 38 0.052
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 37 0.091
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 37 0.091
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 37 0.091
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 37 0.091
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 37 0.091
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 37 0.091
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 37 0.091
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 37 0.091
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 37 0.091
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 37 0.091
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 37 0.091
BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein. 37 0.12
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 36 0.16
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 36 0.16
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 36 0.16
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 36 0.16
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 36 0.16
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 36 0.16
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 36 0.16
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 36 0.16
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 36 0.16
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 36 0.16
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 36 0.16
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 36 0.16
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 36 0.16
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 36 0.21
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 36 0.21
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 36 0.21
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 36 0.21
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 36 0.21
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 36 0.21
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 36 0.21
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 36 0.21
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 36 0.21
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 35 0.37
BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.37
BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.37
AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator av... 35 0.37
U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA bin... 35 0.48
U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein. 35 0.48
U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein. 35 0.48
BC027595-1|AAH27595.1| 295|Homo sapiens deleted in azoospermia-... 35 0.48
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.48
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.48
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.48
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.48
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.48
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 35 0.48
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.48
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.48
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 35 0.48
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.48
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 35 0.48
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 35 0.48
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 35 0.48
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 35 0.48
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 35 0.48
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.64
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.64
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.64
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 34 0.64
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 34 0.64
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 34 0.64
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 34 0.64
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.64
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.64
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.64
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 34 0.64
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 34 0.64
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 34 0.64
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.64
BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.64
BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein. 34 0.64
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 34 0.64
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 34 0.64
AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.64
AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein pr... 34 0.64
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 34 0.64
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 34 0.64
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 34 0.64
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 34 0.64
AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2 p... 34 0.64
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 34 0.64
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 34 0.64
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 34 0.64
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 34 0.85
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 34 0.85
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 34 0.85
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 34 0.85
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 34 0.85
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 34 0.85
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 34 0.85
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 34 0.85
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 34 0.85
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 34 0.85
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 34 0.85
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 34 0.85
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 34 0.85
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 34 0.85
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 34 0.85
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 34 0.85
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 34 0.85
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 34 0.85
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 34 0.85
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 33 1.1
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 33 1.1
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 33 1.1
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 33 1.1
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 33 1.1
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 33 1.1
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 33 1.1
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 33 1.1
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 33 1.1
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 33 1.1
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 33 1.1
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 33 1.1
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 33 1.1
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 33 1.1
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 33 1.5
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 33 1.5
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 33 1.5
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 33 1.5
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 33 1.5
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 33 1.5
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 33 1.5
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 33 1.5
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 33 1.5
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 33 1.5
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 33 2.0
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 33 2.0
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 32 2.6
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 32 2.6
D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein. 32 2.6
D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein. 32 2.6
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 32 2.6
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 32 2.6
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 32 2.6
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 32 2.6
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 32 2.6
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 32 2.6
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 32 2.6
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 32 2.6
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 32 2.6
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 32 2.6
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 32 3.4
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 32 3.4
S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein p... 32 3.4
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 32 3.4
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 32 3.4
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 32 3.4
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 32 3.4
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 32 3.4
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 32 3.4
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 32 3.4
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 32 3.4
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 32 3.4
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 32 3.4
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 32 3.4
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 32 3.4
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 32 3.4
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 32 3.4
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 32 3.4
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 32 3.4
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 32 3.4
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 32 3.4
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 32 3.4
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 32 3.4
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 32 3.4
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 31 4.5
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 31 4.5
U77476-1|AAB84361.1| 295|Homo sapiens DAZLA protein protein. 31 4.5
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 31 4.5
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 31 4.5
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 31 4.5
D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein. 31 4.5
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 31 4.5
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 31 4.5
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 4.5
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 4.5
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 4.5
BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, sing... 31 4.5
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 31 4.5
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 31 4.5
BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, sing... 31 4.5
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 31 4.5
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 31 4.5
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 4.5
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 31 4.5
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 31 4.5
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 4.5
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 31 6.0
D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein. 31 6.0
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 31 7.9
CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein. 31 7.9
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 31 7.9
BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain ... 31 7.9
BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain ... 31 7.9
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 31 7.9
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 31 7.9
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 31 7.9
AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens ... 31 7.9
AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein... 31 7.9
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 31 7.9
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 31 7.9
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 31 7.9
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 31 7.9
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 125 bits (302), Expect = 2e-28
Identities = 87/193 (45%), Positives = 106/193 (54%), Gaps = 13/193 (6%)
Frame = +1
Query: 154 MVDQIEMALDDIIKANKKTRIGGGAGR-KFDANKRTGRGGGA--GFRSNRSGGVQRGR-- 318
M D+++M+LDDIIK N+ R G G GR + A + GRGGGA R NR GG R R
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA 60
Query: 319 ------NRGGITKSTNYSRG-DVNSTWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNL 474
GG + YSR + W+HD+F+ FG +G T G KLLVSNL
Sbjct: 61 IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGG-----GAGVETGG--KLLVSNL 113
Query: 475 DFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGYXXXXXXXXXXXXEGQ*XSITECXLH 654
DFGVSD+DI+ELF+EFG LK A+VHYDRSGRSLG + L
Sbjct: 114 DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAM-KQYNGVPLD 172
Query: 655 GRAMXIQLAXSEI 693
GR M IQL S+I
Sbjct: 173 GRPMNIQLVTSQI 185
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 99.1 bits (236), Expect = 2e-20
Identities = 75/169 (44%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Frame = +1
Query: 223 GAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGR--------NRGGITKSTNYSR-GDVN 369
G GR A R GR GGA R NR GG R R GG + YSR +
Sbjct: 4 GRGR---AGSRAGRRGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRPAPYSRPKQLP 60
Query: 370 STWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASV 546
W+HD+F+ FG +G T G KLLVSNLDFGVSD+DI+ELF+EFG LK A+V
Sbjct: 61 DKWQHDLFDSGFG-----GGAGVETGG--KLLVSNLDFGVSDADIQELFAEFGTLKKAAV 113
Query: 547 HYDRSGRSLGYXXXXXXXXXXXXEGQ*XSITECXLHGRAMXIQLAXSEI 693
HYDRSGRSLG + L GR M IQL S+I
Sbjct: 114 HYDRSGRSLGTANVHFERKADALKAM-KQYNGFPLDGRPMNIQLVTSQI 161
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 44.0 bits (99), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T P ++ V +DF ++SD+++ FS++G +K + DR+G S GY
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 44.0 bits (99), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T P ++ V +DF ++SD+++ FS++G +K + DR+G S GY
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 81
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 44.0 bits (99), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T P ++ V +DF ++SD+++ FS++G +K + DR+G S GY
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 81
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 44.0 bits (99), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T P ++ V +DF ++SD+++ FS++G +K + DR+G S GY
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 44.0 bits (99), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T P ++ V +DF ++SD+++ FS++G +K + DR+G S GY
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 44.0 bits (99), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T P ++ V +DF ++SD+++ FS++G +K + DR+G S GY
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 11 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 69
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 70 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 127
Query: 565 RSLGY 579
RS G+
Sbjct: 128 RSRGF 132
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 214 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 388 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 564
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 565 RSLGY 579
RS G+
Sbjct: 136 RSRGF 140
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.052
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + V N+ + D +KELF E+G +S V D SG+S G+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGF 241
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 37.9 bits (84), Expect = 0.052
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + V N+ + D +KELF E+G +S V D SG+S G+
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGF 77
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.052
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + V N+ + D +KELF E+G +S V D SG+S G+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGF 241
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 37.9 bits (84), Expect = 0.052
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + V N+ + D +KELF E+G +S V D SG+S G+
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGF 226
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.052
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + V N+ + D +KELF E+G +S V D SG+S G+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGF 241
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 37.1 bits (82), Expect = 0.091
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGR----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 384
GGG G++ + GR GGG+G NRS G R RGG RG + +
Sbjct: 208 GGGYGQQDRGGRGRGRSSGGGGGSGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DR 262
Query: 385 DMFNDFG---ERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
FN FG ++ + +S + + V L V+ + + F + GI+K+
Sbjct: 263 GGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 316
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 392 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 446
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
G G G + ++G GGG G+ GG RGR+ GG
Sbjct: 191 GSGGGGGYGNQDQSG-GGGGGYGQQDRGGRGRGRSSGG 227
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 37.1 bits (82), Expect = 0.091
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLDF V +KE+FS G +K A + D+ G+S G
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRG 274
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 37.1 bits (82), Expect = 0.091
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 330
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 6 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 44
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 37.1 bits (82), Expect = 0.091
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLDF V +KE+FS G +K A + D+ G+S G
Sbjct: 255 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRG 294
Score = 33.5 bits (73), Expect = 1.1
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Frame = +1
Query: 214 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 384
IGG AGR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 460 IGGFAGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 517
Query: 385 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 555
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 518 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 577
Query: 556 RSGRSLG 576
+G+S G
Sbjct: 578 -NGKSKG 583
>BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.12
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 163 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 342
+IE D +N + RIG +GR + + GR GG R +R G + G + G +S
Sbjct: 349 EIEEYYDGNTSSNSRQRIGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 407
Query: 343 TNYSR 357
N +R
Sbjct: 408 GNRNR 412
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 44
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N V D +KELFS+FG S V D +G+S G+
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGF 233
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLDF V +KE+FS G +K+ S D+ G+S G
Sbjct: 182 IFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKSRG 221
Score = 31.5 bits (68), Expect = 4.5
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Frame = +1
Query: 214 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 384
IGG GR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 387 IGGITGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 444
Query: 385 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 555
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 445 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 504
Query: 556 RSGRSLG 576
+G+S G
Sbjct: 505 -NGKSKG 510
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 438
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 438
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 438
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.21
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 339
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.5
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 318
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 7.9
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 330
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein family A
member 1 protein.
Length = 199
Score = 35.9 bits (79), Expect = 0.21
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 339
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGDNFRGGGRGGFGRGGGRGGFNK 60
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGR 318
GGG G + GRGGG GFR R GG RGR
Sbjct: 170 GGGRG-----GRGGGRGGGGGFRGGRGGGF-RGR 197
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 438
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.21
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 339
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.5
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 318
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 7.9
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 330
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 438
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 438
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 439 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 35.1 bits (77), Expect = 0.37
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 379 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 558
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGEHARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 559 SGRSLG 576
G+S G
Sbjct: 201 DGKSRG 206
>BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.37
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 360
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.37
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 360
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator aven
protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.37
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 360
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA
binding protein protein.
Length = 295
Score = 34.7 bits (76), Expect = 0.48
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
P + V +D + +++I+ F+ +G +K + DR+G S GY
Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGY 82
>U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein.
Length = 295
Score = 34.7 bits (76), Expect = 0.48
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
P + V +D + +++I+ F+ +G +K + DR+G S GY
Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGY 82
>U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein.
Length = 295
Score = 34.7 bits (76), Expect = 0.48
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
P + V +D + +++I+ F+ +G +K + DR+G S GY
Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGY 82
>BC027595-1|AAH27595.1| 295|Homo sapiens deleted in
azoospermia-like protein.
Length = 295
Score = 34.7 bits (76), Expect = 0.48
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
P + V +D + +++I+ F+ +G +K + DR+G S GY
Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGY 82
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1491 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1539
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 193 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 327
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 34.7 bits (76), Expect = 0.48
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 570
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.48
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 570
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L V NLD + D +++ FS +G++ SA V G S G+
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKV-MTEGGHSKGF 335
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 34.7 bits (76), Expect = 0.48
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 570
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.48
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 570
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L V NLD + D +++ FS +G++ SA V G S G+
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKV-MTEGGHSKGF 335
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 34.7 bits (76), Expect = 0.48
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 379 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 558
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGECARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 559 SGRSLG 576
G+S G
Sbjct: 201 DGKSRG 206
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 79 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 137
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 138 DFGNYNNQSSN 148
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
T L V L ++ D++E+FS +G L +V YD R+GRS G+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGF 162
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 174 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 225
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 154
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 50 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 108
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 109 DFGNYNNQSSN 119
>BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 50 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 108
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 109 DFGNYNNQSSN 119
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 154
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
T L V L ++ D++E+FS +G L +V YD R+GRS G+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGF 162
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 181 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 239
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 240 DFGNYNNQSSN 250
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.64
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.64
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 163 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 342
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 343 TNYSR 357
N +R
Sbjct: 722 GNRNR 726
>BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein.
Length = 467
Score = 34.3 bits (75), Expect = 0.64
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 163 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 342
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 393 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 451
Query: 343 TNYSR 357
N +R
Sbjct: 452 GNRNR 456
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 113 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 164
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 111 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 162
>AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.64
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 163 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 342
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 343 TNYSR 357
N +R
Sbjct: 722 GNRNR 726
>AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein
protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.64
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 163 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 342
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 325 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 383
Query: 343 TNYSR 357
N +R
Sbjct: 384 GNRNR 388
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 155
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 155
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 155
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 173 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 224
>AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2
protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.64
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 163 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 342
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 343 TNYSR 357
N +R
Sbjct: 722 GNRNR 726
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
NS + +T P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 154
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
T L V L ++ D++E+FS +G L +V YD R+GRS G+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGF 162
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.64
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
T L V L ++ D++E+FS +G L +V YD R+GRS G+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGF 162
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLD+ V +KE+FS G++ A + D+ G+S G
Sbjct: 46 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRG 85
>X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion
protein.
Length = 462
Score = 33.9 bits (74), Expect = 0.85
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNY 351
GGG R + GRGGG G R G + G N+ G+ K Y
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVY 273
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein.
Length = 462
Score = 33.9 bits (74), Expect = 0.85
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNY 351
GGG R + GRGGG G R G + G N+ G+ K Y
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVY 273
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLD+ V +KE+FS G++ A + D+ G+S G
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRG 244
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLD+ V +KE+FS G++ A + D+ G+S G
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRG 245
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLD+ V +KE+FS G++ A + D+ G+S G
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRG 245
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 110 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 154
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 160
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 160
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 96 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 140
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 180
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
+ V+NLD+ V +KE+FS G++ A + D+ G+S G
Sbjct: 106 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRG 145
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGY 579
P +L VSN+ F D D++++F +FG IL + +R + G+
Sbjct: 157 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF 201
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N + D +K+LF +FG S V D SG+S G+
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 208
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 312
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N + D +K+LF +FG S V D SG+S G+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N + D +K+LF +FG S V D SG+S G+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N + D +K+LF +FG S V D SG+S G+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 451 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
T + + N + D +K+LF +FG S V D SG+S G+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 33.5 bits (73), Expect = 1.1
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 232 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGER 411
R+ + R+G G+G + + R R+ ++S +YSR D H + R
Sbjct: 12 RESRSASRSGSAHGSGKSARHTPAKSRSRSHRR-SRSRSYSR-DYRRRHSHS-HSPMSTR 68
Query: 412 KLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ + L V L ++ D++E+FS++G + S+ YD +S RS G+
Sbjct: 69 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 125
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 312
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.1
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 259 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 429
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 430 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 537
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 33.1 bits (72), Expect = 1.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+L++ NL F S+ D+K +F++FG + ++ G+ G+
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGF 156
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 33.1 bits (72), Expect = 1.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+L++ NL F S+ D+K +F++FG + ++ G+ G+
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGF 156
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 456
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 113
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 33.1 bits (72), Expect = 1.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+L++ NL F S+ D+K +F++FG + ++ G+ G+
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGF 156
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 32.7 bits (71), Expect = 2.0
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG G GG N D ++ +N
Sbjct: 203 GGGRGDGFGGNDNFGRGGNFSGRGG-FGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 32.7 bits (71), Expect = 2.0
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GGG G F N GRGG R GG G GG N D ++ +N
Sbjct: 203 GGGRGDGFGGNDNFGRGGNFSGRGG-FGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 397 DFGERKLQRNS 429
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein.
Length = 389
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 107 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 149
>X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein.
Length = 372
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 107 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 149
>D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein.
Length = 285
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 6 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 48
>D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein.
Length = 288
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 6 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 48
>D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein.
Length = 403
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 182
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +1
Query: 427 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 567
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 406
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 182
>BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 182
>BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 182
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +1
Query: 427 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 567
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +1
Query: 427 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 567
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein.
Length = 188
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 115 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 157
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 387
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 163 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 217
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +1
Query: 427 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 567
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 442 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
T L V NL VS+ ++E FS+FG ++ A V D GRS G
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTG 412
>X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5
protein.
Length = 396
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 442 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
T L V NL VS+ ++E FS+FG ++ A V D GRS G
Sbjct: 57 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTG 101
>S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein
protein.
Length = 195
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 330
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 103 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 140
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 356 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 396
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 442 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
T L V NL VS+ ++E FS+FG ++ A V D GRS G
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTG 412
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 366 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 406
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGY 59
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 442 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
T L V NL VS+ ++E FS+FG ++ A V D GRS G
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTG 412
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 356 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 396
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 442 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
T L V NL VS+ ++E FS+FG ++ A V D GRS G
Sbjct: 295 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTG 339
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGY 59
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 442 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
T L V NL VS+ ++E FS+FG ++ A V D GRS G
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTG 412
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 332 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 372
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 59
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 59
>U77476-1|AAB84361.1| 295|Homo sapiens DAZLA protein protein.
Length = 295
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
P + V +D + + +I+ F+ +G + + DR+G S GY
Sbjct: 39 PNTVFVGGIDVRMDEXEIRSFFARYGSVXEVKIITDRTGVSKGY 82
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
K+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 111
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 59
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGY 579
K+ V L + S D+K+ F++FG + ++ D +GRS G+
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGF 111
>D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein.
Length = 407
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 134 PTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRG 176
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 463 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+ N + D +K+LF +FG S V D SG+S G+
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 59
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 397 DFGERKLQRNS 429
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 397 DFGERKLQRNS 429
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein.
Length = 189
Score = 31.5 bits (68), Expect = 4.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 85 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 141
Query: 397 DFGERKLQRNS 429
DFG Q+ S
Sbjct: 142 DFGNYSGQQQS 152
>BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 134 PTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRG 176
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 463 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+ N + D +K+LF +FG S V D SG+S G+
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 58
>BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + + +++ + FG + S + D SG S G
Sbjct: 134 PTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRG 176
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 463 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+ N + D +K+LF +FG S V D SG+S G+
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
+ V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 59
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 397 DFGERKLQRNS 429
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 463 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+ N + D +K+LF +FG S V D SG+S G+
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 463 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGY 579
+ N + D +K+LF +FG S V D SG+S G+
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGF 233
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +1
Query: 217 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 396
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 397 DFGERKLQRNS 429
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 463 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGY 579
V N+ + ++ +K++FSE G + S + YDR +G+ GY
Sbjct: 11 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGY 50
>D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 448 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 576
PT L +SNL + +++ + FG + S + D SG S G
Sbjct: 107 PTNLYISNLPLSMDKQELENMLKPFGQVISTRILRDASGTSRG 149
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 130 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 309
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 310 RGR--NRGG 330
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.9
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 330
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 331 ITKSTNYSRGDV 366
K++ RG V
Sbjct: 80 FGKTSLNHRGRV 91
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 130 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 309
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 310 RGR--NRGG 330
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain
containing 1 protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.9
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 330
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 331 ITKSTNYSRGDV 366
K++ RG V
Sbjct: 80 FGKTSLNRRGRV 91
>BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain
containing 1 protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.9
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 330
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 331 ITKSTNYSRGDV 366
K++ RG V
Sbjct: 80 FGKTSLNHRGRV 91
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 30.7 bits (66), Expect = 7.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 558
KL V + G+ + D+K LF EFG + +V DR
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDR 81
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 130 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 309
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 310 RGR--NRGG 330
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 130 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 309
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 310 RGR--NRGG 330
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ14766 fis, clone NT2RP3004041. ).
Length = 318
Score = 30.7 bits (66), Expect = 7.9
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 330
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 331 ITKSTNYSRGDV 366
K++ RG V
Sbjct: 80 FGKTSLNHRGRV 91
>AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein
protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.9
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 330
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 331 ITKSTNYSRGDV 366
K++ RG V
Sbjct: 80 FGKTSLNRRGRV 91
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 30.7 bits (66), Expect = 7.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 558
KL V + G+ + D+K LF EFG + +V DR
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDR 81
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 30.7 bits (66), Expect = 7.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 454 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 558
KL V + G+ + D+K LF EFG + +V DR
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDR 81
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 130 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 309
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 310 RGR--NRGG 330
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 130 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 309
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 310 RGR--NRGG 330
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,393,181
Number of Sequences: 237096
Number of extensions: 2425139
Number of successful extensions: 6832
Number of sequences better than 10.0: 245
Number of HSP's better than 10.0 without gapping: 4956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6408
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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