Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_G18
(1048 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 0.45
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 0.46
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 25 1.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 25 1.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 25 1.8
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 31 1.8
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 31 1.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 4.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 9.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 9.9
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.5 bits (58), Expect(2) = 0.45
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 761 GAPPPPPPXXXXXXXGGGGP 702
GAPPPPPP G GGP
Sbjct: 647 GAPPPPPP---PPPSGAGGP 663
Score = 23.8 bits (49), Expect(2) = 0.45
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 860 GXKKXKKTXXPXPPXPXFFFFFXXXPXXXKXXXGAPPPPPP 738
G + + P PP P F P APPPPPP
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISS----AAPPPPPP 635
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.5 bits (58), Expect(2) = 0.46
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 761 GAPPPPPPXXXXXXXGGGGP 702
GAPPPPPP G GGP
Sbjct: 473 GAPPPPPP---PPPSGAGGP 489
Score = 23.8 bits (49), Expect(2) = 0.46
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 860 GXKKXKKTXXPXPPXPXFFFFFXXXPXXXKXXXGAPPPPPP 738
G + + P PP P F P APPPPPP
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISS----AAPPPPPP 461
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 25.0 bits (52), Expect(2) = 1.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 761 GAPPPPPP 738
GAPPPPPP
Sbjct: 245 GAPPPPPP 252
Score = 24.2 bits (50), Expect(2) = 1.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 755 PPPPPPXXXXXXXGGGGPXXXKKXKKK 675
PPPPPP G P ++ K +
Sbjct: 249 PPPPPPPPAQLMASSGTPSLAEQLKMR 275
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 25.0 bits (52), Expect(2) = 1.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 761 GAPPPPPP 738
GAPPPPPP
Sbjct: 231 GAPPPPPP 238
Score = 24.2 bits (50), Expect(2) = 1.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 755 PPPPPPXXXXXXXGGGGPXXXKKXKKK 675
PPPPPP G P ++ K +
Sbjct: 235 PPPPPPPPAQLMASSGTPSLAEQLKMR 261
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 761 GAPPPPPP 738
GAPPPPPP
Sbjct: 231 GAPPPPPP 238
Score = 24.2 bits (50), Expect(2) = 1.8
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 755 PPPPPPXXXXXXXGGGGPXXXKKXKKK 675
PPPPPP G P ++ K +
Sbjct: 235 PPPPPPPPAQLMASSGTPSLAEQLKMR 261
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 695 FXGAPPPPXXXXXXXGGGGG 754
F GAPPPP GGGGG
Sbjct: 277 FGGAPPPPSGSAMGGGGGGG 296
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 695 FXGAPPPPXXXXXXXGGGGG 754
F GAPPPP GGGGG
Sbjct: 171 FGGAPPPPSGSAMGGGGGGG 190
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 758 APPPPPPXXXXXXXGGGG 705
APPPPPP GGGG
Sbjct: 53 APPPPPPACGGGCGGGGG 70
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 758 APPPPPPXXXXXXXGGGG 705
APPPPPP GGGG
Sbjct: 110 APPPPPPACGGGCGGGGG 127
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 706 PPPPXXXXXXXGGGGGGAPXXXXXXXGXXKKKKKXXGXGGXG 831
PPPP GGGGGG G G GG G
Sbjct: 112 PPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGA 703
G PPPPPP GGG A
Sbjct: 63 GAPPPPPPPPAFGGLGGGAA 82
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGA 703
G PPPPPP GGG A
Sbjct: 63 GAPPPPPPPPAFGGLGGGAA 82
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGA 703
G PPPPPP GGG A
Sbjct: 63 GAPPPPPPPPAFGGLGGGAA 82
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGAP 700
GGPPPPPP GG P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP 760
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 763 GGPPPPPPXXXXXXXXGGGGP 701
GGPPPPPP GG P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPP 744
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 428 PPPPXTPXXFKKGGXNFPPPXXGXPP 351
PPPP P GG PPP G PP
Sbjct: 714 PPPPGLPPI--TGGPPPPPPPGGLPP 737
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -3
Query: 839 TXXPXPPXPXFFF--FFXXXPXXXKXXXGAPPPPPPXXXXXXXGGGGP 702
T P PP P P G PPPPPP GG P
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGAP 700
GGPPPPPP GG P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP 760
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 763 GGPPPPPPXXXXXXXXGGGGP 701
GGPPPPPP GG P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPP 744
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 428 PPPPXTPXXFKKGGXNFPPPXXGXPP 351
PPPP P GG PPP G PP
Sbjct: 714 PPPPGLPPI--TGGPPPPPPPGGLPP 737
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -3
Query: 839 TXXPXPPXPXFFF--FFXXXPXXXKXXXGAPPPPPPXXXXXXXGGGGP 702
T P PP P P G PPPPPP GG P
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGAP 700
GGPPPPPP GG P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPP 343
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 763 GGPPPPPPXXXXXXXXGGGGP 701
GGPPPPPP GG P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPP 327
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 428 PPPPXTPXXFKKGGXNFPPPXXGXPP 351
PPPP P GG PPP G PP
Sbjct: 297 PPPPGLPPI--TGGPPPPPPPGGLPP 320
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -3
Query: 839 TXXPXPPXPXFFF--FFXXXPXXXKXXXGAPPPPPPXXXXXXXGGGGP 702
T P PP P P G PPPPPP GG P
Sbjct: 322 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGAP 700
G PPPPPP G G+P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSP 255
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGAP 700
G PPPPPP G G+P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSP 276
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 762 GGPPPPPPXXXXXXXGGGGAP 700
G PPPPPP G G+P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSP 261
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 830 PXPPXPXFFFFFXXXPXXXKXXXGAPPPPPP 738
P PP P P G PPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.0 bits (52), Expect(2) = 9.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 761 GAPPPPPP 738
GAPPPPPP
Sbjct: 806 GAPPPPPP 813
Score = 21.4 bits (43), Expect(2) = 9.8
Identities = 8/25 (32%), Positives = 8/25 (32%)
Frame = -3
Query: 755 PPPPPPXXXXXXXGGGGPXXXKKXK 681
PPPPPP P K
Sbjct: 810 PPPPPPPGGLMHVAASAPVLMSNSK 834
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.0 bits (52), Expect(2) = 9.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 761 GAPPPPPP 738
GAPPPPPP
Sbjct: 806 GAPPPPPP 813
Score = 21.4 bits (43), Expect(2) = 9.9
Identities = 8/25 (32%), Positives = 8/25 (32%)
Frame = -3
Query: 755 PPPPPPXXXXXXXGGGGPXXXKKXK 681
PPPPPP P K
Sbjct: 810 PPPPPPPGGLMHVAASAPVLMSNSK 834
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,241
Number of Sequences: 27780
Number of extensions: 287644
Number of successful extensions: 3682
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2782955308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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