Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_G16
         (1061 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.31 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.95 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.3  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   2.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.31
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = -1

Query: 860 PGRXXGRGGXGDPXXXGGKXGNGRPGXXNGXXXRPLXNR 744
           PG   G  G G P   GG  G   PG   G   R   +R
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHR 238


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.95
 Identities = 17/60 (28%), Positives = 18/60 (30%)
 Frame = +1

Query: 667 PXPPXXGXXXAPPCXXXPPPSPPPXGRXXRGLXXXPFXXPGRPFPXFPPXXXGSPXPPLP 846
           P PP       PP    PPP  PP           P           P    G P PP+P
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISP--QNSNLSGGMPSGMVGPPRPPMP 303


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
 Frame = +1

Query: 721 PPSPPPXGRXXRGLXXXPFXXPGRPFPXFPP-XXXGSPXPPLPXXRP 858
           PP PPP G     L   P   P    P  P     G   PP+    P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVP 631


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -1

Query: 857 GRXXGRGGXGDPXXXGGKXGNGRPGXXNGXXXRP 756
           GR  GRG  G     GG  G G  G  NG   RP
Sbjct: 78  GRGRGRGRGG--RDGGGGFGGGGYGDRNGDGGRP 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,677
Number of Sequences: 2352
Number of extensions: 8164
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 118396512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)