Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_G15
(947 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.098
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.098
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.098
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.23
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.39
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.39
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.39
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.39
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.098
Identities = 24/71 (33%), Positives = 25/71 (35%)
Frame = +1
Query: 691 PPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXPXPPPQI 870
PP GG P P PPPP G P A G PP P PP Q
Sbjct: 283 PPAGGSPPP----PRAGSPPPPPPPRGSPPTGSLPPPQAGG--SPPPAGTGSPPPPPRQK 336
Query: 871 XKXPRXXPPLG 903
+ P PP G
Sbjct: 337 RQAPERSPPTG 347
Score = 30.3 bits (65), Expect = 2.1
Identities = 38/140 (27%), Positives = 40/140 (28%), Gaps = 5/140 (3%)
Frame = +1
Query: 499 KKXFPPXGSPXXXXXXKXFXXKKXXXXXXKKGAXTNPP----GGXXKKXLFSXPPXXXXG 666
K+ PP GSP K A +PP G S PP G
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 667 XXGXXX-GXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKX 843
G PP P P L PPP GG S P G PP K
Sbjct: 288 SPPPPRAGSPPP--PPPPRGSPPTGSL--PPPQAGG------SPPPAGTGSPPPPPRQKR 337
Query: 844 XXPXPPPQIXKXPRXXPPLG 903
P P P PP G
Sbjct: 338 QAPERSPPTGSPPTGSPPTG 357
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.098
Identities = 24/71 (33%), Positives = 25/71 (35%)
Frame = +1
Query: 691 PPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXPXPPPQI 870
PP GG P P PPPP G P A G PP P PP Q
Sbjct: 304 PPAGGSPPP----PRAGSPPPPPPPRGSPPTGSLPPPQAGG--SPPPAGTGSPPPPPRQK 357
Query: 871 XKXPRXXPPLG 903
+ P PP G
Sbjct: 358 RQAPERSPPTG 368
Score = 30.3 bits (65), Expect = 2.1
Identities = 38/140 (27%), Positives = 40/140 (28%), Gaps = 5/140 (3%)
Frame = +1
Query: 499 KKXFPPXGSPXXXXXXKXFXXKKXXXXXXKKGAXTNPP----GGXXKKXLFSXPPXXXXG 666
K+ PP GSP K A +PP G S PP G
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 667 XXGXXX-GXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKX 843
G PP P P L PPP GG S P G PP K
Sbjct: 309 SPPPPRAGSPPP--PPPPRGSPPTGSL--PPPQAGG------SPPPAGTGSPPPPPRQKR 358
Query: 844 XXPXPPPQIXKXPRXXPPLG 903
P P P PP G
Sbjct: 359 QAPERSPPTGSPPTGSPPTG 378
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.098
Identities = 24/71 (33%), Positives = 25/71 (35%)
Frame = +1
Query: 691 PPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXPXPPPQI 870
PP GG P P PPPP G P A G PP P PP Q
Sbjct: 289 PPAGGSPPP----PRAGSPPPPPPPRGSPPTGSLPPPQAGG--SPPPAGTGSPPPPPRQK 342
Query: 871 XKXPRXXPPLG 903
+ P PP G
Sbjct: 343 RQAPERSPPTG 353
Score = 30.3 bits (65), Expect = 2.1
Identities = 38/140 (27%), Positives = 40/140 (28%), Gaps = 5/140 (3%)
Frame = +1
Query: 499 KKXFPPXGSPXXXXXXKXFXXKKXXXXXXKKGAXTNPP----GGXXKKXLFSXPPXXXXG 666
K+ PP GSP K A +PP G S PP G
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 667 XXGXXX-GXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKX 843
G PP P P L PPP GG S P G PP K
Sbjct: 294 SPPPPRAGSPPP--PPPPRGSPPTGSL--PPPQAGG------SPPPAGTGSPPPPPRQKR 343
Query: 844 XXPXPPPQIXKXPRXXPPLG 903
P P P PP G
Sbjct: 344 QAPERSPPTGSPPTGSPPTG 363
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.23
Identities = 41/178 (23%), Positives = 51/178 (28%)
Frame = +1
Query: 385 PPQKXKXXPNKEXXSXXXXXPPPXXXXKKXXXXPPPXXKKXFPPXGSPXXXXXXKXFXXK 564
PP + + PPP ++ PP + PP GS + F
Sbjct: 301 PPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGS-FGAPPPQQFHAP 359
Query: 565 KXXXXXXKKGAXTNPPGGXXKKXLFSXPPXXXXGXXGXXXGXPPXGGXXXPWXFXPXXXL 744
++ PG F+ PP G G PP P
Sbjct: 360 SPQSFGGPPPPVSSAPGN------FAPPP--QSGPPGAF--APPPSAFGAPQG-PGGPGG 408
Query: 745 LXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXPXPPPQIXKXPRXXPPLGGLXAP 918
PPPP G + P G F PP PPP P PP G AP
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP-TGFPPVGAPPPGAAGAP 465
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = +1
Query: 691 PPXGGXXXPWXFXPXXX---LLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXPXPP 861
PP P F P + PPP GG P G PP P PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPP----PPMFAGGIPPPPPMMGGIPPPP 108
Query: 862 PQIXKXPRXXPPLGGLXAP 918
P P PP G AP
Sbjct: 109 PMFGAPPPPPPPSGLGVAP 127
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +1
Query: 673 GXXXGXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXP 852
G PP G P P PPPP G P LPP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 853 XPPPQIXKXPRXXPPLGG 906
PPP P PP G
Sbjct: 761 PPPPPGGCPPPPPPPPPG 778
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/91 (29%), Positives = 28/91 (30%)
Frame = +1
Query: 646 PPXXXXGXXGXXXGXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXL 825
PP G PP GG P PPPP GG P
Sbjct: 715 PPPGLPPITGGPPPPPPPGG------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 826 PPXXKXXXPXPPPQIXKXPRXXPPLGGLXAP 918
PP P PPP K PP G+ AP
Sbjct: 769 PPPP----PPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 753 PPPGGGXXXIXFLXAPPGKGVFXXXXXXKXXXPXAPXPNXXXPPXXPPLGGF 908
PPP GG I PP P P PP PP GGF
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +1
Query: 673 GXXXGXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXP 852
G PP G P P PPPP G P LPP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 853 XPPPQIXKXPRXXPPLGG 906
PPP P PP G
Sbjct: 761 PPPPPGGCPPPPPPPPPG 778
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/91 (29%), Positives = 28/91 (30%)
Frame = +1
Query: 646 PPXXXXGXXGXXXGXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXL 825
PP G PP GG P PPPP GG P
Sbjct: 715 PPPGLPPITGGPPPPPPPGG------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 826 PPXXKXXXPXPPPQIXKXPRXXPPLGGLXAP 918
PP P PPP K PP G+ AP
Sbjct: 769 PPPP----PPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 753 PPPGGGXXXIXFLXAPPGKGVFXXXXXXKXXXPXAPXPNXXXPPXXPPLGGF 908
PPP GG I PP P P PP PP GGF
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +1
Query: 673 GXXXGXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXLPPXXKXXXP 852
G PP G P P PPPP G P LPP P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 853 XPPPQIXKXPRXXPPLGG 906
PPP P PP G
Sbjct: 344 PPPPPGGCPPPPPPPPPG 361
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/91 (29%), Positives = 28/91 (30%)
Frame = +1
Query: 646 PPXXXXGXXGXXXGXPPXGGXXXPWXFXPXXXLLXPPPPXGGXXXXFFSXPXXARGFFXL 825
PP G PP GG P PPPP GG P
Sbjct: 298 PPPGLPPITGGPPPPPPPGG------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 826 PPXXKXXXPXPPPQIXKXPRXXPPLGGLXAP 918
PP P PPP K PP G+ AP
Sbjct: 352 PPPP----PPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 753 PPPGGGXXXIXFLXAPPGKGVFXXXXXXKXXXPXAPXPNXXXPPXXPPLGGF 908
PPP GG I PP P P PP PP GGF
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 850 PXPPPQIXKXPRXXPPLGGLXAP 918
P PPP + P PP GGL P
Sbjct: 580 PPPPPMLGGPPPPPPPPGGLMGP 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,028,490
Number of Sequences: 27780
Number of extensions: 270222
Number of successful extensions: 487
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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