Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_G06
         (939 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243...    30   3.1  
04_04_0561 - 26250488-26251451,26251499-26251620                       29   4.0  
07_03_0837 + 21870106-21870509,21870601-21870778                       29   5.3  
04_03_0653 - 18429736-18431379                                         29   5.3  
04_03_0303 + 14108902-14109208,14109259-14109286,14110120-141105...    29   5.3  
06_03_0998 - 26742608-26742802,26743137-26743325,26743600-267436...    29   7.1  

>09_01_0165 -
           2436769-2437442,2438159-2438224,2438318-2438415,
           2439856-2440214
          Length = 398

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
 Frame = +3

Query: 465 PHSFHPRVPNYSAAAPTLAD--PAXQTRAPSH*GRLREWTXXXPP*TVSGAGGTPPY 629
           P S+ P  PN  A         P  Q RAP + G  +E+    PP   +  G  P Y
Sbjct: 272 PPSYQPHAPNPQAGYTNYQGGVPGYQGRAPGYQGGNQEYRGPPPPPPSAYQGNNPGY 328


>04_04_0561 - 26250488-26251451,26251499-26251620
          Length = 361

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +2

Query: 212 PCIQAVTRPRNIKLWVRGAACC-----RLAGEAARATWARCDARTARR 340
           PC++ V   R +KLW+R  +       RLA +  R T  RC     RR
Sbjct: 241 PCLRPVVLTRKVKLWLRQHSQVTRRSERLAKQPTRPTMERCQRVLFRR 288


>07_03_0837 + 21870106-21870509,21870601-21870778
          Length = 193

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +2

Query: 290 EAARATWARCDARTARRCWRSGPSYSCSSRTSRPRRALPPRHDRRLY*C 436
           E       R   RTARR W    +     R +R R +L PRH R+   C
Sbjct: 50  EVGATRHGRPQQRTARRMWERPTAVVDWRRIARRRWSLVPRHIRKAAGC 98


>04_03_0653 - 18429736-18431379
          Length = 547

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 269 ACCRLAGEAARATWARCDARTARRCWRSGPSYS-CSSRTSRPRRALPPRHDRRL 427
           AC R  G+AA A   + DA   R   R+   ++ C S    PR A+ PR  R L
Sbjct: 90  ACVRAHGDAAGADARKLDAAIGRCERRAIRGFADCVSAFMEPRVAVAPRRARSL 143


>04_03_0303 +
           14108902-14109208,14109259-14109286,14110120-14110505,
           14111071-14111604,14112362-14112445,14112933-14113516
          Length = 640

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 278 RLAGEAARATWARCDARTARRCWRSGPSYSCSSRTSR 388
           R+  +  R  WA  D  T     R   SY+C+S+ SR
Sbjct: 168 RIENDGVRLGWAIVDHSTCAEAKRDKSSYACASKHSR 204


>06_03_0998 -
           26742608-26742802,26743137-26743325,26743600-26743657,
           26743990-26744056,26744368-26746504
          Length = 881

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 302 ATWARCDARTARRCWRSGPSYSCSSRTSRPRRALPPRHDRRL 427
           AT+A      A R  RS P+ S   R + PR+   PRH RRL
Sbjct: 145 ATFAYRARHAAVRYLRSIPNASWFFRVAIPRQPFGPRHVRRL 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,172,355
Number of Sequences: 37544
Number of extensions: 319412
Number of successful extensions: 1007
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)