Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_G06
         (939 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016445-11|AAC69054.1|  248|Caenorhabditis elegans Pharyngeal g...    30   2.1  
AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical ...    30   2.1  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    30   2.1  
AC006672-1|AAK84544.1|  305|Caenorhabditis elegans Hypothetical ...    30   2.1  
AF016445-5|AAC69059.1|  250|Caenorhabditis elegans Hypothetical ...    29   6.3  

>AF016445-11|AAC69054.1|  248|Caenorhabditis elegans Pharyngeal
           gland toxin-relatedprotein 4 protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -1

Query: 276 QHAAPRTHSFMLRGRVTAWIQGVCASIFANFSTKCPAIFDNGFC 145
           Q    R  S    G VT    G C S  A+ S+ C A   NGFC
Sbjct: 184 QRTCGRCPSTTGSGTVTTASSGSCTSFAADSSSSCSAWAANGFC 227


>AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical
           protein T05B4.10 protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -1

Query: 276 QHAAPRTHSFMLRGRVTAWIQGVCASIFANFSTKCPAIFDNGFC 145
           Q    R  S    G VT    G C S  A+ S+ C A   NGFC
Sbjct: 187 QRTCGRCPSTTASGSVTV-TSGTCTSYIADSSSNCAAWSTNGFC 229


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -1

Query: 276 QHAAPRTHSFMLRGRVTAWIQGVCASIFANFSTKCPAIFDNGFC 145
           Q    R  S    G VT    G C S  A+ S+ C A   NGFC
Sbjct: 249 QRTCGRCPSTTAAGSVTV-TSGTCTSYIADSSSNCAAWSTNGFC 291


>AC006672-1|AAK84544.1|  305|Caenorhabditis elegans Hypothetical
           protein K08D12.5 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 592 PELCPALGAHLRMLVLITSAPSHAEARAAIRFTWGXYXXRRXLTIXFMLGTP 747
           PEL   L A   +LVL+T+  S  E R  +R +W  Y     + + F++G P
Sbjct: 56  PELPDELPAP-NVLVLVTTIASEFEMRNQVRKSWANY-TSNAVRVKFLMGIP 105


>AF016445-5|AAC69059.1|  250|Caenorhabditis elegans Hypothetical
           protein T05B4.9 protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -1

Query: 276 QHAAPRTHSFMLRGRVTAWIQGVCASIFANFSTKCPAIFDNGFC 145
           Q    R  S    G VT    G C S  A+ S+ C +   NGFC
Sbjct: 187 QRTCGRCPSTTASGSVTV-TSGTCTSYIADSSSNCASWSRNGFC 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,512,694
Number of Sequences: 27780
Number of extensions: 236207
Number of successful extensions: 623
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)