Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_G03
(957 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0080 + 587674-588510 33 0.077
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.0
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.4
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 31 1.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 27 2.8
09_06_0237 + 21788886-21789965 29 5.5
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 29 5.5
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.5
01_01_0083 + 631196-631675 29 5.5
07_01_0176 - 1244704-1245102 29 7.2
02_05_0963 - 33126238-33126831 29 7.2
02_05_0002 - 24849189-24849825,24850267-24850328 29 7.2
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 28 9.6
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 28 9.6
02_04_0382 - 22501041-22501279,22501717-22501810 28 9.6
>07_01_0080 + 587674-588510
Length = 278
Score = 32.7 bits (71), Expect(2) = 0.077
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 487 PPPXGGGGXFXXXXPPPPPP 428
PP GG G F PPPPPP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPP 98
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PPP G PPPPPP
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPP 115
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PPP G PPPPPP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPP 116
Score = 21.4 bits (43), Expect(2) = 0.077
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 445 PPPPPPXXXKK 413
PPPPPP ++
Sbjct: 116 PPPPPPLFTRR 126
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PPP G F PPPPPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPP 571
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 502 PXKXXPPPX--GGGGXFXXXXPPPPPP 428
P + PPP G G F PPPPPP
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PPP G PPPPPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PPP G PPPPPP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPP 569
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 429 GGGGGGFXXKKXPPPPXGGG 488
GGGGGG PPPP GG
Sbjct: 81 GGGGGGTVMYTSPPPPYSGG 100
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 430 GGGGGXXXXKKXPPPXGGGG 489
GGGGG PPP GGG
Sbjct: 82 GGGGGTVMYTSPPPPYSGGG 101
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPPXXXKKKK 407
P P GGGG PPPPPP ++ +
Sbjct: 26 PLPPIPSCGGGGGGAGPTPPPPPPPPHHRRAR 57
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 484 PPXGGGGXFXXXXPPPPPPXXXKKKKK 404
P GGGG PPPPPP ++ +
Sbjct: 31 PSCGGGGGGAGPTPPPPPPPPHHRRAR 57
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.5 bits (58), Expect(2) = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 487 PPPXGGGGXFXXXXPPPPP 431
PPP G F PPPPP
Sbjct: 42 PPPQGAPPPFLAPPPPPPP 60
Score = 21.0 bits (42), Expect(2) = 2.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 445 PPPPPP 428
PPPPPP
Sbjct: 92 PPPPPP 97
>09_06_0237 + 21788886-21789965
Length = 359
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 429 GGGGGGFXXKKXPPPPXGG 485
GGGGGG+ P PP GG
Sbjct: 149 GGGGGGWRVVPVPEPPLGG 167
>07_03_1140 -
24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 429 GGGGGGFXXKKXPPPPXGGG 488
GGGGG PPP GGG
Sbjct: 9 GGGGGSLWGPPQPPPSTGGG 28
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 502 PXKXXPPPX--GGGGXFXXXXPPPPPP 428
P + PPP GGGG PPP PP
Sbjct: 14 PPQHPPPPQAGGGGGGEFYRGPPPQPP 40
>01_01_0083 + 631196-631675
Length = 159
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 487 PPPXGGGGXFXXXXPPPPPP 428
PP GGGG P PPPP
Sbjct: 93 PPAGGGGGGGGFNYPAPPPP 112
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 406 FFFFXPXXGGGGGXXXXKKXPPPXGGGGXFF 498
++ + P GGGGG + P GGGG F
Sbjct: 74 YWNYPPPQGGGGGYIPYYQPPAGGGGGGGGF 104
>07_01_0176 - 1244704-1245102
Length = 132
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 429 GGGGGGFXXKKXPPPPXGGG 488
GGGGGGF PP GGG
Sbjct: 42 GGGGGGFFEVPWFGPPGGGG 61
>02_05_0963 - 33126238-33126831
Length = 197
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PP GGG + PPPP P
Sbjct: 141 PPLYSPPGWGGGHAYDFLQPPPPSP 165
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 496 KXXPPPXGGGGXFXXXXPPPPPP 428
K P GGG PPPPPP
Sbjct: 203 KPQPADTSGGGGHPHPPPPPPPP 225
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 502 PXKXXPPPXGGGGXFXXXXPPPPPP 428
P PPP G G PPP PP
Sbjct: 93 PAPTMPPPSSGSGHTLPSPPPPLPP 117
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 475 GGGGXFXXXXPPPPPP 428
GGGG PPPPPP
Sbjct: 93 GGGGWVQLPPPPPPPP 108
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = -3
Query: 502 PXKXXPPPX---GGGGXFXXXXPPPPPP 428
P PPP GGGG + PPPPPP
Sbjct: 78 PDYYDPPPSPYYGGGGGYGK--PPPPPP 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,094,893
Number of Sequences: 37544
Number of extensions: 307513
Number of successful extensions: 4082
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3443
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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