Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_G02
(908 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.7
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 6.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 6.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 6.7
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 8.9
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 82 ISSLSNNYNYNNYNNNY 98
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 82 ISSLSNNYNYNNYNNNY 98
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 82 ISSLSNNYNYNNYNNNY 98
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 82 ISSLSNNYNYNNYNNNY 98
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 315 ISSLSNNYNYNNYNNNY 331
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 315 ISSLSNNYNYNNYNNNY 331
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 315 ISSLSNNYNYNNYNNNY 331
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 315 ISSLSNNYNYNNYNNNY 331
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 315 ISSLSNNYNYNNYNNNY 331
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ +NYN+N+
Sbjct: 304 ISSLSNNYNYNNYNNNY 320
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ NYN+N+
Sbjct: 82 ISSLSNNYNYSNYNNNN 98
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ NYN+N+
Sbjct: 82 ISSLSNNYNYSNYNNNN 98
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ NYN+N+
Sbjct: 82 ISSLSNNYNYSNYNNNN 98
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ NYN+N+
Sbjct: 82 ISSLSNNYNYSNYNNNN 98
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ NYN+N+
Sbjct: 82 ISSLSNNYNYSNYNNNN 98
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 609 VASLTN*FHVDNYNSNH 559
++SL+N ++ NYN+N+
Sbjct: 82 ISSLSNNYNYSNYNNNN 98
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 528 QNQTQYLQKIDDWNYNYPHEINWLMKQLCLLIFF 629
+N+ Y+Q +DW Y + ++ +L L IFF
Sbjct: 459 RNEDLYIQTREDWKY-----VAMVIDRLQLYIFF 487
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 347 VQSDLEHIKQNLRQK 391
+Q DL+HI QN+ K
Sbjct: 171 IQIDLKHINQNMGDK 185
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 431 RKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNP 541
R++ + H L +E I+ Q +RMK + + ++ P
Sbjct: 299 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKGTP 335
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 8.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 155 VDLELKQAFVDLQVLMIETKKTIEN 229
V+ +L Q ++DL+V ETK +E+
Sbjct: 1040 VNDQLGQLYLDLEVEGFETKLVLED 1064
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,538
Number of Sequences: 438
Number of extensions: 3851
Number of successful extensions: 33
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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