Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F17
         (958 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    38   0.008
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    38   0.008
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    35   0.099
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      31   1.6  
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    31   1.6  
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    29   6.5  
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       29   6.5  
AF016430-5|AAB65373.1|  581|Caenorhabditis elegans Hypothetical ...    29   6.5  

>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +2

Query: 269 FHGLLSRGDLVDVXXAAEGRLLQAHKLVLSVCXPYFREMXXMN 397
           F+ L S+  L DV    E R L AHK++L+   PYFR M  ++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLD 83


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +2

Query: 269 FHGLLSRGDLVDVXXAAEGRLLQAHKLVLSVCXPYFREMXXMN 397
           F+ L S+  L DV    E R L AHK++L+   PYFR M  ++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLD 83


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 34.7 bits (76), Expect = 0.099
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 275 GLLSRGDLVDVXXAAEGRLLQAHKLVLSVCXPYFREM 385
           GL +R  L DV      + + AH++VLS C PYF  M
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSM 84


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 293 DLVDVXXAAEGRLLQAHKLVLSVCXPYFREM 385
           +L DV     G +++AH+ +L+   PYF+ M
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAM 139


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 293 DLVDVXXAAEGRLLQAHKLVLSVCXPYFREM 385
           +L DV     G +++AH+ +L+   PYF+ M
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAM 139


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = +2

Query: 194 VVAIMASDEQFSLCWNNFHAXMSAGFHGLLSRGDLVDVXXAAEGRLLQAHKLVLSVCXPY 373
           V  I  ++E       N    +   +  L S+  L D      G++++AHK VL+   P 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 374 FREM 385
           F  M
Sbjct: 226 FNAM 229


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = +2

Query: 194 VVAIMASDEQFSLCWNNFHAXMSAGFHGLLSRGDLVDVXXAAEGRLLQAHKLVLSVCXPY 373
           V  I  ++E       N    +   +  L S+  L D      G++++AHK VL+   P 
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225

Query: 374 FREM 385
           F  M
Sbjct: 226 FNAM 229


>AF016430-5|AAB65373.1|  581|Caenorhabditis elegans Hypothetical
           protein C05C8.6 protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +2

Query: 257 MSAGFHGLLSRGDLVDVXXAAE-GRLLQAHKLVLSVCXPYFREM--XXMNPPHHPIVFXX 427
           +S  F  + +  D  DV    + G    AH+L+L+V   +FR M        H  +V   
Sbjct: 50  LSQSFDEIFTSTDHSDVTLVLDDGTEFAAHRLILAVRSSFFRAMLYTGFQESHQQLVTLQ 109

Query: 428 DVXHSALRDLL-XXYVSRVKF 487
           +    A R +L   Y S++ F
Sbjct: 110 ETNSVAFRAVLRYMYTSKIDF 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,504
Number of Sequences: 27780
Number of extensions: 253786
Number of successful extensions: 330
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)