Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F15
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 44 2e-05
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 44 2e-05
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 44 3e-05
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 44 3e-05
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 42 2e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 42 2e-04
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 39 0.001
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 37 0.003
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 36 0.006
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 36 0.008
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 35 0.018
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 34 0.024
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 34 0.032
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.042
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 33 0.042
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.042
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 33 0.056
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 33 0.056
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 32 0.097
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 32 0.13
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 32 0.13
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 31 0.17
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 31 0.17
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 31 0.23
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 31 0.23
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 31 0.23
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 30 0.52
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 29 0.91
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 29 1.2
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 1.2
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 28 1.6
SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomy... 28 1.6
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 28 2.1
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 27 2.8
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 27 2.8
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 27 2.8
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 4.8
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 6.4
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 6.4
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 26 6.4
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 26 6.4
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 26 8.5
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 26 8.5
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 44.4 bits (100), Expect = 2e-05
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = +2
Query: 137 HTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE-RIEGTVTLKQSISLHSGLCLTLHAQIL 313
HT+ V ++ + + L + S D T+++ + R+ + I HS ++A +
Sbjct: 234 HTDIVNDVQFHPQHEALLA-SVSDDCTLQIHDTRLNPEEEAPKVIQAHSK---AINAVAI 289
Query: 314 PCANKPLLLCALDDHKIHIF-VGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQD 490
N LL A D + ++ + Y R HTL GHED V GL+ +D I+AS+S D
Sbjct: 290 NPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLE--WSPHDEPILASSSTD 347
Query: 491 TYIRLWRIQKV 523
+ +W ++K+
Sbjct: 348 RRVCIWDLEKI 358
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 44.4 bits (100), Expect = 2e-05
Identities = 45/140 (32%), Positives = 65/140 (46%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSI 268
W G+ +T L+GHT V ++ DR V + S DSTIK+W +E T T +
Sbjct: 378 WHFSGGK-RIT--LRGHTGPVNSV--RIIRDRGLVLSGSDDSTIKIWS-LE-TNTCLHTF 430
Query: 269 SLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLE 448
S H G Q L A+ L C+LD I + E HTL GH + G V E
Sbjct: 431 SAHIG-----PVQSLALADSRLFSCSLDG-TIKQWDIEKKKCVHTLFGH---IEG--VWE 479
Query: 449 VDNDTIIVASASQDTYIRLW 508
+ D + + S + D +++W
Sbjct: 480 IAADHLRLISGAHDGVVKVW 499
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +2
Query: 53 CSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 232
CSL I+ W ++ + T L GH EGV I D L + + + D +KVWE
Sbjct: 450 CSLDGTIK---QWDIEKKKCVHT--LFGHIEGVWEIAA----DHLRLISGAHDGVVKVWE 500
Query: 233 RIEGTVTLK 259
E TLK
Sbjct: 501 ACECVHTLK 509
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 44.0 bits (99), Expect = 3e-05
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Frame = +2
Query: 83 SSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQ 262
+ +T Q G + + +GHT V +I + D Y+ D TIK W+ I G +
Sbjct: 250 AEFTPQAGARSPLILCEGHTGPVMDIV--FSDDPSVAYSVGQDHTIKTWDLITGQ-NVDS 306
Query: 263 SISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIF---VGEDYHRAHTLVGHEDWVRG 433
I+ LC + + L++C I + G D +HTL GH++ V G
Sbjct: 307 KITKAPLLC------VEKLTDLHLVICGSSARHIVVHDPRAGSDKIVSHTLSGHKNLVSG 360
Query: 434 LDVLEVDNDTIIVASASQDTYIRLWRIQ 517
L + + AS S D R+W ++
Sbjct: 361 LSA--SPENPYMFASVSHDNTCRVWDVR 386
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 44.0 bits (99), Expect = 3e-05
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2
Query: 404 LVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRI 514
L GH DWVR L + T +AS SQD YIRLW I
Sbjct: 187 LRGHLDWVRTLSFKKTSGSTATLASGSQDRYIRLWNI 223
Score = 32.3 bits (70), Expect = 0.097
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 594 VKLEAXLAGHEXWVYXVQWHP 656
+ +A L GHE WV V WHP
Sbjct: 258 IVFDALLMGHEDWVMSVDWHP 278
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 110 WNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQ--SISLHS 280
WN +LKGH+ VT I + D + +A D + + E+ E + SI HS
Sbjct: 568 WNQQQVLKGHSLTVTTI--KFSPDDRYILSAGRDRLVCLHEQAENLLDYNNFASIKAHS 624
Score = 26.2 bits (55), Expect = 6.4
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Frame = +2
Query: 50 VCSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNI-YGNYHGDRLTVYTASTDSTIKV 226
VC ++ I + S + + + + ++L+GH + V + + G T+ + S D I++
Sbjct: 162 VCGSSKKIMVYGSDSAISS-FKLKAVLRGHLDWVRTLSFKKTSGSTATLASGSQDRYIRL 220
Query: 227 WE-RIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHT 403
W + G+ K S + +NKP+ KI + + D
Sbjct: 221 WNISLWGSEDEKVSEEFFESVL----------SNKPVRFTL---GKIDLKIVFDA----L 263
Query: 404 LVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLW 508
L+GHEDWV +D ++ S+S D+ + +W
Sbjct: 264 LMGHEDWVMSVDWHPTKE---MILSSSADSSMIVW 295
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIE 241
W G+W + GHT+ V + + G +A TD T +++ R +
Sbjct: 353 WKQDAGQWLQLPSISGHTKSVKGVAWDPEGK--FYLSAGTDQTTRLFARFK 401
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 41.5 bits (93), Expect = 2e-04
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Frame = +2
Query: 89 WTLQNGRWNV---TSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE-----RIEG 244
W L+ G++ V T I GH E VT+I + + T STD + +WE R
Sbjct: 271 WDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWEPDMFSRPSE 330
Query: 245 TVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTL------ 406
T+ L + S +P N L+ A +D K+ DY +
Sbjct: 331 TICLSSQVDSSSQCIPATCLSFIPENNMEFLVGA-EDGKLQRGYRSDYSETKAVQPSNVS 389
Query: 407 -VGHEDWVRGLDVLEVDNDTIIV-------ASASQDTYIRLWRIQKVKAQPE 538
GH ++ G+DV+ ++ + + ++S D +RLW+ + Q E
Sbjct: 390 YEGHNVFISGIDVMTSNSQNVFLEKNKDFALTSSFDWTVRLWQCSPSRNQHE 441
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 41.5 bits (93), Expect = 2e-04
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLH-SGLCLTLHA 304
L GH + VT + + ++ + T+S+D TIK+W + T L+ ++ H G+ +
Sbjct: 50 LFGHEKSVTCV--SVSPNKRWIATSSSDGTIKIWSAL--TFRLECTLFGHYRGI-----S 100
Query: 305 QILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASAS 484
Q+ L A DD I I+ E L GH ++V +D + T++V S S
Sbjct: 101 QVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL--GTLLV-SGS 157
Query: 485 QDTYIRLWRIQ 517
D +R+W +Q
Sbjct: 158 WDETVRIWNLQ 168
Score = 30.7 bits (66), Expect = 0.30
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +2
Query: 230 ERIEGTVTLKQSISLHSGLCLTL-HAQILPCA----NKPLLLCALDDHKIHIFVGEDYHR 394
E+I + +S S S C H + + C NK + + D I I+ +
Sbjct: 29 EQIHKRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRL 88
Query: 395 AHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQK 520
TL GH RG+ ++ + +ASAS D IR+W +K
Sbjct: 89 ECTLFGH---YRGISQVKWATGSKYLASASDDKTIRIWDFEK 127
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGT 247
LKGHT V++I N G L + S D T+++W +GT
Sbjct: 134 LKGHTNYVSSIDFNPLGTLLV--SGSWDETVRIWNLQDGT 171
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 38.7 bits (86), Expect = 0.001
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Frame = +2
Query: 125 ILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHA 304
+L+GH V ++ Y + TAS+D T++ W+ G H + H
Sbjct: 342 VLRGHLASVNSV--QYSSKTGLIVTASSDRTLRTWDITTG----------HCIRIIHAHQ 389
Query: 305 QILPCA--NKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVAS 478
+ + CA N ++ D I IF L GHED +R + ND IV S
Sbjct: 390 RGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRF----NDEKIV-S 444
Query: 479 ASQDTYIRLW 508
D +R+W
Sbjct: 445 GGYDGTVRIW 454
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.1 bits (82), Expect = 0.003
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Frame = +2
Query: 50 VCSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 229
VCS + I ++S+ Q V +L+GHT+ V + + G L T + D+T+++W
Sbjct: 339 VCSNTEFIDVISTDGTQ-----VFGVLEGHTDIVLTLDSSEDGVWLA--TGAKDNTVRLW 391
Query: 230 E-RIEGTV-TLKQSISLHSGLCLTLHAQILPCANKPLLLCALD-DHKIHIF-VGEDYHRA 397
IE V + H+ + L P L + D + F +G +++
Sbjct: 392 NLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKS 451
Query: 398 H-------TLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLW 508
T+ H+ R ++ ++V D I+ASASQD I+LW
Sbjct: 452 DFSNRAVWTIKAHD---RDVNAIQVSKDGRIIASASQDKTIKLW 492
Score = 29.5 bits (63), Expect = 0.69
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQ 307
+K H V I + G R+ + +AS D TIK+W+ G V G+
Sbjct: 461 IKAHDRDVNAIQVSKDG-RI-IASASQDKTIKLWDSSTGEVV---------GVLRGHRRG 509
Query: 308 ILPCANKPL---LLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVAS 478
+ C+ P L D I I+ + TL GH + L ++ + T +V S
Sbjct: 510 VWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAI--LKLIYISQGTQVV-S 566
Query: 479 ASQDTYIRLWRI 514
A+ D +++W +
Sbjct: 567 AAADGLVKVWSL 578
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 404 LVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRI 514
L GH D V LD E D + +A+ ++D +RLW +
Sbjct: 360 LEGHTDIVLTLDSSE---DGVWLATGAKDNTVRLWNL 393
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 36.3 bits (80), Expect = 0.006
Identities = 36/127 (28%), Positives = 59/127 (46%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQ 307
L+GHT+ V + GD + +AS D T++VW+ G + H G ++
Sbjct: 573 LRGHTDSVREVA--CLGD--LIVSASYDGTLRVWKASTGVCL--HVLRGHVGRVYSV--T 624
Query: 308 ILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQ 487
I P ++ + A D KI I+ E TL GH + V + + + ++ ASA
Sbjct: 625 INP--SRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLV---SQVTFNQNILVSASAPP 679
Query: 488 DTYIRLW 508
DT +R+W
Sbjct: 680 DTSLRVW 686
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 170 YHGDRLTVYTASTDSTIKVWE 232
Y GD T+ T STD T++VW+
Sbjct: 454 YVGD--TLVTGSTDRTVRVWD 472
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 35.9 bits (79), Expect = 0.008
Identities = 30/133 (22%), Positives = 54/133 (40%)
Frame = +2
Query: 110 WNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLC 289
W +GH+ V ++ N D T ++ D T+KVW G+ ++ H
Sbjct: 131 WKCVQTFEGHSRYVMSLAINPK-DTNTFASSCLDGTVKVWSF--GSSVANFTLQAHDRG- 186
Query: 290 LTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTII 469
+ P +KP L+ A DD+ I ++ + L GH + + I
Sbjct: 187 -VNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGH---TNNVSFAFFHSKFPI 242
Query: 470 VASASQDTYIRLW 508
+ S S+D +++W
Sbjct: 243 IISGSEDGTVKIW 255
Score = 33.9 bits (74), Expect = 0.032
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 125 ILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCL 292
IL+GHT V+ + +H + + S D T+K+W + ++ + SL C+
Sbjct: 223 ILEGHTNNVS--FAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCI 276
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYH--GDRLTVYTASTDSTIKVWE 232
W+ + N T L+ H GV Y NY+ GD+ + TA D+ IKVW+
Sbjct: 169 WSFGSSVANFT--LQAHDRGVN--YVNYYPAGDKPYLITAGDDNLIKVWD 214
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 34.7 bits (76), Expect = 0.018
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Frame = +2
Query: 197 TASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIF- 373
T + D T+K W + T + I+ S + A+ P + +L+ D+ +H++
Sbjct: 429 TCAMDRTVKFWNYEKSTEEPEHLITTDSPVW---KARFTPFGDGVILMPQRGDNSVHMYD 485
Query: 374 ---VGEDYHRA-HTLVGHEDWV-------RGLDVLEVDNDTIIVASASQDTYIRLWRI 514
+ ++ RA H GH D V RG DV + D + + S+D ++RLW I
Sbjct: 486 CRNLDKEGPRAVHRFAGHTDQVKEFLWRCRGEDVFDRDLRDFQLITWSKDHHVRLWPI 543
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 34.3 bits (75), Expect = 0.024
Identities = 37/145 (25%), Positives = 54/145 (37%)
Frame = +2
Query: 74 RLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVT 253
R + W L +G +T L GH V + + L ++ D +K W+ V
Sbjct: 185 RTIKIWDLASGVLKLT--LTGHIATVRGLAVSPRHPYL--FSCGEDKMVKCWDLETNKVI 240
Query: 254 LKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRG 433
L L LH + +L+ A D ++ H L GH+ V
Sbjct: 241 RHYHGHLSGVYALKLHPTL------DVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVAS 294
Query: 434 LDVLEVDNDTIIVASASQDTYIRLW 508
L V E D V + S D+ IRLW
Sbjct: 295 LAVQEFDPQ---VVTGSMDSTIRLW 316
Score = 31.5 bits (68), Expect = 0.17
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Frame = +2
Query: 110 WNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGT--VTLKQSISLHSG 283
W + ++ GH V + + T + D TIK+W+ G +TL I+ G
Sbjct: 153 WTLMRVISGHLGWVRCV--DVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRG 210
Query: 284 LCLT-LHAQILPCANKPLLLC-ALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDN 457
L ++ H + C ++ C L+ +K V YH GH + G+ L++
Sbjct: 211 LAVSPRHPYLFSCGEDKMVKCWDLETNK----VIRHYH------GH---LSGVYALKLHP 257
Query: 458 DTIIVASASQDTYIRLW 508
++ +A +D R+W
Sbjct: 258 TLDVLVTAGRDAVARVW 274
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSI 268
W ++ R NV +L GH V ++ + V T S DSTI++W+ G +
Sbjct: 274 WDMRT-RQNV-HVLSGHKSTVASLAVQEFDPQ--VVTGSMDSTIRLWDLAAGKTLTTLTH 329
Query: 269 SLHSGLCLTLH 301
+ L+LH
Sbjct: 330 HKKTVRALSLH 340
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 33.9 bits (74), Expect = 0.032
Identities = 28/116 (24%), Positives = 51/116 (43%)
Frame = +2
Query: 170 YHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCAL 349
+H + + T+ + I++W+ GT L H G + +PL +
Sbjct: 19 FHPTQPWILTSLHNGRIQLWDYRMGT--LLDRFDGHDGPVRGIAFH----PTQPLFVSGG 72
Query: 350 DDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQ 517
DD+K++++ + +L GH D+VR V ++ + S S D IR+W Q
Sbjct: 73 DDYKVNVWNYKSRKLLFSLCGHMDYVR---VCTFHHEYPWILSCSDDQTIRIWNWQ 125
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 329 PLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLW 508
P +L DD I I+ + + L GH +V D I+ SAS D +R+W
Sbjct: 108 PWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVM-CAAFHPSEDLIV--SASLDQTVRVW 164
Query: 509 RIQKVK 526
I ++
Sbjct: 165 DISGLR 170
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.5 bits (73), Expect = 0.042
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +2
Query: 50 VCSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 229
V SL Q+IR+ W++ + L+GH E V +I + D + + S D TIKVW
Sbjct: 460 VGSLDQIIRV---WSVSG---TLVERLEGHKESVYSIA--FSPDSSILLSGSLDKTIKVW 511
Query: 230 ERIEGTVTLKQSISLHSGLC 289
E ++ T ++ S G+C
Sbjct: 512 E-LQATRSVGLSAIKPEGIC 530
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.5 bits (73), Expect = 0.042
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 7/163 (4%)
Frame = +2
Query: 41 DFRVCSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTI 220
D + + L +++ WT + L GH E V ++ + G L + S D+TI
Sbjct: 428 DGQFIAAGSLDKVIRIWTSSG---TLVEQLHGHEESVYSVAFSPDGKYLV--SGSLDNTI 482
Query: 221 KVWERIEGTVTLKQSISLHSGLC---LTLHAQ-ILPCANKP---LLLCALDDHKIHIFVG 379
K+WE ++ + S+ G+C T H IL P ++ D I +
Sbjct: 483 KLWE-LQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP 541
Query: 380 EDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLW 508
+ H TL GH + V + V + A+ S D R+W
Sbjct: 542 DSPHSQLTLQGHNNSVIS---VAVSPNGHCFATGSGDLRARIW 581
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 33.5 bits (73), Expect = 0.042
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 170 YHGDRLTVYTASTDSTIKVWERIEG--TVTLKQSISLHSGLCLTLHAQIL 313
Y D + T + D IKVW+ G VT Q S SGLC + +L
Sbjct: 347 YSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVL 396
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 232
L GH V + G + D+ T+YT S D + VW+
Sbjct: 186 LTGHKNTVVS--GFFSKDQQTIYTVSKDGALFVWK 218
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 33.1 bits (72), Expect = 0.056
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Frame = +2
Query: 80 LSSWTLQN-GRWNVTSILK----GHTEGVTNIYGNY-HGDRLTVYTASTDSTIKVWE--R 235
LS W L + S+LK H + V+++ +Y H D L + S D + V + R
Sbjct: 209 LSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLA--SVSYDQYLHVHDIRR 266
Query: 236 IEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYH-RAHTLVG 412
+ + +S+ HSG +H+ N +L D I ++ + + R HTL G
Sbjct: 267 PDASTKPARSVHAHSG---PIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEG 323
Query: 413 HEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQKV 523
HED V + ++ I+AS S D +W + ++
Sbjct: 324 HEDIVTKISF--SPHEEPILASTSADRRTLVWDLSRI 358
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 33.1 bits (72), Expect = 0.056
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = +2
Query: 167 NYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQ-ILPCANK----P 331
N H +T S D V ++ + ++ S++L C H ++ A +
Sbjct: 205 NDHVKEITCLAISNDGRWIVTGGLDHRIVIRDSVTLEPQHCWKHHRDAVMGLAMRRGTNE 264
Query: 332 LLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWR 511
+ C+ D I ++ + TL GH+D + G+D L + V+ +D RLW+
Sbjct: 265 MFSCSAD-RSIKVWSLDQMSYIETLFGHQDVIFGVDALARER---CVSVGGRDRTSRLWK 320
Query: 512 I 514
I
Sbjct: 321 I 321
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 32.3 bits (70), Expect = 0.097
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 229
L GHT+ V +I D T+ TAS+D+TIK+W
Sbjct: 212 LVGHTDNVRDIL--ISDDGRTILTASSDATIKLW 243
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 31.9 bits (69), Expect = 0.13
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +2
Query: 176 GDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDD 355
G+RL +AS D + +W+ + T K +H + HA P + A D
Sbjct: 358 GERLV--SASDDLQLILWDPQKST---KPITKMHGHQKVVNHASFSPDGR--CIATASFD 410
Query: 356 HKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQKVK 526
+ ++ G+ TL GH V + D+ ++ S+SQDT +++W ++ K
Sbjct: 411 SSVRLWDGKTGKFLATLRGH---VAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKK 464
Score = 31.9 bits (69), Expect = 0.13
Identities = 37/154 (24%), Positives = 65/154 (42%)
Frame = +2
Query: 47 RVCSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKV 226
R+ S + ++L+ W Q +T + GH + V + ++ D + TAS DS++++
Sbjct: 360 RLVSASDDLQLIL-WDPQKSTKPITK-MHGHQKVVN--HASFSPDGRCIATASFDSSVRL 415
Query: 227 WERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTL 406
W+ G K +L + Q + LL+ + D + ++ L
Sbjct: 416 WDGKTG----KFLATLRGHVAAVY--QCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDL 469
Query: 407 VGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLW 508
GHED V +D D VAS D +R+W
Sbjct: 470 PGHEDQVFAVD---WSPDGQRVASGGADKAVRIW 500
Score = 28.7 bits (61), Expect = 1.2
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQ 307
+KGHT V+ + + D + T S D+TI+ W+ +G+ + ++ H+ + L Q
Sbjct: 173 MKGHTNWVSCVA--WAPDASIIATGSMDNTIRFWDPKKGS-PIGDALRRHTKPIMALCWQ 229
Query: 308 ---ILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVAS 478
+ P + LL D+ + I+ + TL GH + + I S
Sbjct: 230 PLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGH---TAPITCVRWGGQNWIY-S 285
Query: 479 ASQDTYIRLW 508
+S D IR+W
Sbjct: 286 SSYDKTIRIW 295
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 31.9 bits (69), Expect = 0.13
Identities = 35/140 (25%), Positives = 64/140 (45%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSI 268
W L++G+ +L H + + + +G +L T+S D T+K+W+ + V+L +I
Sbjct: 334 WDLRSGK--SIMVLDEHIRQIVAMAWSPNGYQLA--TSSADDTVKIWDLRK--VSLAHTI 387
Query: 269 SLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLE 448
HS L + I N+ + D + ++ + ++VGHE+ V +D
Sbjct: 388 PAHSSLVSDVR-YIESGVNRFIATSGYDG-CVKLWNPLNCSLIKSMVGHEEKVMSVDGY- 444
Query: 449 VDNDTIIVASASQDTYIRLW 508
D I S+ D I+LW
Sbjct: 445 --GDRFI--SSGYDRTIKLW 460
Score = 29.1 bits (62), Expect = 0.91
Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 12/160 (7%)
Frame = +2
Query: 86 SWTLQNGRWNVTSI-----LKGHTEGVTNI-------YGNYHGDRLTVYTASTDSTIKVW 229
SW Q WN ++ +GHT+ V+ + + ++LT+ T + D+T+ +W
Sbjct: 191 SWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLW 250
Query: 230 ERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLV 409
+ + T L+ L L P + L+ A D ++ D H L+
Sbjct: 251 KASQSTPLLR----LEGHLARVGRVAFHPSGD--YLVSASFDTTWRLW---DVHTGVELL 301
Query: 410 GHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQKVKA 529
E G+ + D +V+S D R+W ++ K+
Sbjct: 302 MQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKS 341
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 31.5 bits (68), Expect = 0.17
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +2
Query: 113 NVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGL-- 286
N+ + H+E +T++ ++ T+ TASTD T+KVW+ + G V L S+ HS
Sbjct: 323 NLVKQFQAHSEYITSL--DFSHPFGTLATASTDKTVKVWD-MAGVVYL-GSLKGHSDYVS 378
Query: 287 CLTLHAQILPCA--NKPLLLCALDDHKIH 367
CL + + + + L LD+ +H
Sbjct: 379 CLAIQDSFIATGSMDTTVRLWNLDNDVLH 407
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 401 TLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRI 514
+L GH D+V L + D+ I A+ S DT +RLW +
Sbjct: 369 SLKGHSDYVSCLAI----QDSFI-ATGSMDTTVRLWNL 401
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 131 KGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 232
+GHT VT I +H D + T+S D T+KVW+
Sbjct: 80 EGHTNNVTAIA--FHCDGKWLATSSEDGTVKVWD 111
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSI 268
W+ ++ + + L+GH V + + D + TAS+D ++WE G T++Q
Sbjct: 242 WSTEDMSFMLERRLQGHQRWVWDCA--FSADSTYLVTASSDHVARLWELSSGE-TIRQYS 298
Query: 269 SLH-SGLCLTLH 301
H + +C+ L+
Sbjct: 299 GHHKAAVCVALN 310
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 398 HTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRI 514
HTL+GH D VR + I+ S S D+ IR+WR+
Sbjct: 501 HTLIGHTDSVR-----TISGYGDILVSGSYDSSIRIWRV 534
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 50 VCSLAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 229
+C + + + W L G +L+GH VT + N +RL + S DSTI++W
Sbjct: 561 ICISGSMDKSIRVWDLSTGTCKY--VLEGHDAFVTLL--NVFQNRLI--SGSADSTIRIW 614
Query: 230 E 232
+
Sbjct: 615 D 615
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 116 VTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSG 283
+T++ H + + + +Y+G RL T S+D TIKV+ TL +++ HSG
Sbjct: 1 MTTVDTQHDDMIHDAILDYYGKRLA--TCSSDQTIKVFSIENNQQTLLETLRGHSG 54
Score = 29.1 bits (62), Expect = 0.91
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 401 TLVGHEDWVRGLD-VLEVDNDTIIVASASQDTYIRLWRIQKVKAQPESKLIKVEEK 565
TL GH DW R + V +ASASQD + +W K P K EEK
Sbjct: 200 TLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIW--TKEGDGPWQKTPLTEEK 253
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 LHAQILPCANKPLLLCALDDHKIHIFVGEDYHRA--HTLVGHEDWVRGLDVLEVDNDTII 469
+H IL K L C+ D I +F E+ + TL GH V L TI+
Sbjct: 12 IHDAILDYYGKRLATCS-SDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTIL 70
Query: 470 VASASQDTYIRLWR 511
ASAS D ++ +WR
Sbjct: 71 -ASASYDGHVIVWR 83
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 31.1 bits (67), Expect = 0.23
Identities = 33/144 (22%), Positives = 57/144 (39%)
Frame = +2
Query: 89 WTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSI 268
W L+ G T GHT V ++ + D V + S D TIK+W I G +
Sbjct: 90 WDLEKGE--CTHQFVGHTSDVLSV--SISPDNRQVVSGSRDKTIKIW-NIIGNCKYTITD 144
Query: 269 SLHSGLCLTLHAQILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLE 448
HS + + P + + A D + ++ E + + GH +V +
Sbjct: 145 GGHSDWVSCV--RFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYV---SAVT 199
Query: 449 VDNDTIIVASASQDTYIRLWRIQK 520
+ D + AS +D + LW + +
Sbjct: 200 ISPDGSLCASGGRDGTLMLWDLNE 223
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 74 RLLSSWTL-QNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTV 250
+ + W + N ++ +T GH++ V+ + + + D LT +A D +KVW+ +E T
Sbjct: 127 KTIKIWNIIGNCKYTITD--GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD-LE-TF 182
Query: 251 TLKQSISLHSG 283
+L+ S H+G
Sbjct: 183 SLRTSHYGHTG 193
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 29.9 bits (64), Expect = 0.52
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +2
Query: 191 VYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKIHI 370
+YT S D TIK W G +++ H+ L L + LLL D + +
Sbjct: 105 IYTGSWDHTIKKWNVSTGECV--ETLIGHTDYVKCL----LLLEEEGLLLSGSTDASLIV 158
Query: 371 F-VGEDYHRA-HTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQKV 523
+ V R + L GH RG++ + +T I + ++ IR W I KV
Sbjct: 159 WDVSSQPSRLLYKLTGHS---RGIECITRQPNTDIFWTCGSESSIRCWHITKV 208
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 353 DHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQKVKAQ 532
DH I + TL+GH D+V+ L +LE + ++ S S D + +W V +Q
Sbjct: 111 DHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEG---LLLSGSTDASLIVW---DVSSQ 164
Query: 533 PESKLIKV 556
P L K+
Sbjct: 165 PSRLLYKL 172
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 29.1 bits (62), Expect = 0.91
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -3
Query: 490 ILRSRRYDNCVVINFQHVKSPNPVFVSNQSMRSVIVLTDEYMYFVV 353
++++ RYDN + + + SP +F+ N+++ S + D Y Y VV
Sbjct: 373 LVQALRYDNPISSDERFQPSPLALFLVNRAISSPSIGNDLYWYLVV 418
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 128 LKGHTEGVTNIYGNYHGDRLTVYTAST-DSTIKVWERIEGT--VTLKQSISLHS 280
LKGH+ V + YH V +S+ D+TIK+W+ +G V+LK + S
Sbjct: 130 LKGHSRKVGLV--QYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQS 181
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 28.7 bits (61), Expect = 1.2
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +2
Query: 131 KGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGL-CLTLHAQ 307
KGHT V ++ G TAS D T ++W + L+ S + C+T H
Sbjct: 418 KGHTGPVWDVAFGPFGHYFA--TASHDQTAQLWS-CDHIYPLRVFAGHLSDVDCVTFHP- 473
Query: 308 ILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQ 487
N +L D ++ D HR H++ + + + + D +ASA
Sbjct: 474 -----NSAYVLTGSSDKTCRLW---DVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADS 525
Query: 488 DTYIRLWRI 514
+ I LW I
Sbjct: 526 EGLIHLWDI 534
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 434 LDVLEVDNDTIIVASASQDTYIRLWRIQ-KVKAQPESKLIK 553
++ E D+ ++A Q++YIRLW I+ K+ P+S ++
Sbjct: 327 MNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVE 367
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 152 TNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGL 286
T + Y + TV+ D T+K E I GT+T K + H L
Sbjct: 269 TGPFSRYTHWKQTVFYTHKDLTVKAGEYIRGTITCKPAEGNHREL 313
>SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 431 GLDVLEVDNDTIIVASASQDTYIRLWRIQKVKAQPESKLIKVEEK 565
G D+ D+ I ++SAS DT+ + R K + QP K K EK
Sbjct: 242 GGDLTTEDDFDIALSSASADTFKKGSRSTKSRPQPNPKRQKKNEK 286
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 59 LAQLIRLLSSWTLQNGRWNVTSILKGHTEGVTNIY---GNYHGDRLTVYTASTDSTIKVW 229
++ L+ S++ N S GH + ++ G RL YTAS D+TI++W
Sbjct: 147 ISTLVDQNSTFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRL--YTASEDNTIRIW 204
Query: 230 ERIEGTVTLKQSISLHS-GLCLTL 298
+ T L +I+L S C+T+
Sbjct: 205 D--VSTGNLLTTIALPSTPSCMTV 226
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.5 bits (58), Expect = 2.8
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Frame = +2
Query: 197 TASTDSTIKVW------ERIEGTVTLKQSISLHSGLCLTLHAQILPCANKP---LLLCAL 349
TAS D T+K+W + + GT ++ L + +L P + +L
Sbjct: 494 TASADHTVKLWSLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDDVLAVKISPDGRFVAASL 553
Query: 350 DDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLW 508
D+ + ++ + L GH+ V +D + D+ ++ + S D +++W
Sbjct: 554 LDNTVKVYYLDSLKFFLNLYGHKLPVLSMD---ISYDSKLLVTCSADKNVKIW 603
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/110 (21%), Positives = 43/110 (39%)
Frame = +2
Query: 185 LTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDHKI 364
L++ T + W + T + ++ L GLCL L N L KI
Sbjct: 80 LSIITLDESGLLCQW--LLKTCDRRATLQLCDGLCLKLFR-----LNNNFLAVTGTFLKI 132
Query: 365 HIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRI 514
++ ++ T GHEDW + ++ +++ A D + LW +
Sbjct: 133 YLIRISNFQIVATWTGHEDWP---ILFPFKDEALLIPVAYSDGSVSLWSV 179
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 410 GHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWRIQKVKAQ 532
GH+ V +DV D +T + SAS D IRLW ++ Q
Sbjct: 110 GHKQTVTSIDVSPAD-ETFL--SASLDNTIRLWDLRSPNCQ 147
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 410 GHEDWVRGLDVLEVDNDTIIVASASQDTYIRLWR 511
GHED V L EV ++ I+ S S D +R W+
Sbjct: 389 GHEDCVWELFCHEVKDNNPILLSLSSDGTVRGWK 422
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 247 RTFYSFPNFNGRISGCSVNSKSVSMVISIYIGNSFCMSLENTGDI 113
R ++++ F G C++++K V + IG S C+ L DI
Sbjct: 226 RPWWAWLFFTGFFLSCTISTKYVGFFTFLSIGLSVCLELWYLWDI 270
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 134 GHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 232
GH++ VT + +G R YT S D+TI W+
Sbjct: 87 GHSKIVTTTTFDKNGSRF--YTGSLDNTIHCWD 117
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 101 NGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWER 235
+G+ V+++ H + + N L TAS+D+T+K+W R
Sbjct: 375 DGKAPVSTVSHAHDNSIVALRYNLRISLLL--TASSDTTVKLWSR 417
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 197 TASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILP-CANKPLLLCALDDHKIHIF 373
T TD+T+++W + G+ K +++H A I L C+LDD I
Sbjct: 512 TVGTDATLRIWALLPGSSAWK-CVAIHHFANTHSQASIKQRYGFSKALTCSLDDSIIGFG 570
Query: 374 VGEDYH 391
G H
Sbjct: 571 YGSCMH 576
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 125 ILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE-RIEGTV-TLKQSISLHSGLCLTL 298
+ GH V + ++H + + T S+D T ++W+ R GTV S S LC++
Sbjct: 482 VFVGHQNDVDCV--SFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSA 539
Query: 299 HAQILPCANK 328
L A++
Sbjct: 540 DGLSLASADE 549
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 113 NVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIK 223
NV I+ G T G IYG Y GD T++ A ++ IK
Sbjct: 387 NVPCII-GATIGC--IYGGYFGDYFTLWAAKRNNGIK 420
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,581,863
Number of Sequences: 5004
Number of extensions: 74905
Number of successful extensions: 307
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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