Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F14
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.11 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   0.49 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   1.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   1.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect(2) = 0.11
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
           P P    F      PPPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPP 789



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 746 PPPPPPP 766
           PPPPPPP
Sbjct: 784 PPPPPPP 790



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 746 PPPPPPP 766
           PPPPPPP
Sbjct: 785 PPPPPPP 791



 Score = 21.4 bits (43), Expect(2) = 0.11
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 746 PPPPPPPXXXXG 781
           PPPPPP     G
Sbjct: 786 PPPPPPSSLSPG 797


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect(2) = 0.49
 Identities = 12/38 (31%), Positives = 14/38 (36%)
 Frame = -1

Query: 762 GGGGGGXXXXXKXXXGXGGGXXXXNXXKRXXXXGGXXG 649
           GGGGG          G GGG    +  +     GG  G
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNG 250



 Score = 21.0 bits (42), Expect(2) = 0.49
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 765 GGGGGGG 745
           GGGGGGG
Sbjct: 168 GGGGGGG 174


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.2 bits (45), Expect(2) = 1.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 780 PXXXXGGGGGGG 745
           P    GGGGGGG
Sbjct: 650 PGSGGGGGGGGG 661



 Score = 21.8 bits (44), Expect(2) = 1.4
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
 Frame = -1

Query: 765 GGGGGG--GXXXXXKXXXGXGGG 703
           GGGGGG  G         G GGG
Sbjct: 659 GGGGGGSVGSGGIGSSSLGGGGG 681


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.2 bits (45), Expect(2) = 1.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 780 PXXXXGGGGGGG 745
           P    GGGGGGG
Sbjct: 543 PAGVGGGGGGGG 554



 Score = 21.4 bits (43), Expect(2) = 1.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 765 GGGGGGGXXXXXKXXXGXG 709
           GGGGGGG         G G
Sbjct: 547 GGGGGGGGGGGGGGVIGSG 565


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 746 PPPPPPP 766
           PPPPPPP
Sbjct: 530 PPPPPPP 536


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 783 IPXXXXGGGGGGG 745
           IP    GGGGGGG
Sbjct: 526 IPNGGGGGGGGGG 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,222
Number of Sequences: 2352
Number of extensions: 6365
Number of successful extensions: 153
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)