Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F14
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.40
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.40
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.40
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.40
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.40
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 0.67
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.93
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.93
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.93
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.93
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.2
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 25 1.6
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 25 1.6
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 25 1.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 1.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 30 1.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 2.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 2.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 26 3.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 26 3.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 6.6
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 6.6
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 6.6
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 6.6
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 6.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 6.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.7
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 657 PPPXXFXFXPXXXXXLPPXXXXXFXXXXXXPPPPPP 764
PPP F P +PP PPPPPP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 657 PPPXXFXFXPXXXXXLPPXXXXXFXXXXXXPPPPPP 764
PPP F P +PP PPPPPP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P PP + + PPP P PPPPPPP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 236 PPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P PP + + PPP P PPPPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P PP + + PPP P PPPPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPPPPP 242
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect(2) = 0.67
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPX-PXXFFXXXXXPPPPPPP 766
P PP LL + PPP P P PPPPP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP 542
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P P LL L PPP P PPPPPP
Sbjct: 473 PGPPSSLLPLINT---NAPPPPPMPSINGHAPNPPPPPP 508
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +2
Query: 659 PPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPP 763
PP + + PP P PPPPPP
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 746 PPPPPPP 766
PPPPPPP
Sbjct: 579 PPPPPPP 585
Score = 21.4 bits (43), Expect(2) = 0.67
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 746 PPPPPPPXXXXG 781
PPPPPP G
Sbjct: 580 PPPPPPSFMFNG 591
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P PP L PPP P PPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P F PPPPPPP
Sbjct: 773 PPPPPGGF---KGGPPPPPPP 790
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPPXXXXG 781
P PP L PPP P PPPPPPP G
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P PP L PPP P PPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P F PPPPPPP
Sbjct: 773 PPPPPGGF---KGGPPPPPPP 790
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPPXXXXG 781
P PP L PPP P PPPPPPP G
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKG 782
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.1 bits (67), Expect = 0.93
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPP 90
Score = 31.1 bits (67), Expect = 0.93
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPP 91
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPP 89
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP PPPPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPPP 92
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPP 766
P PP L PPP P PPPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P F PPPPPPP
Sbjct: 356 PPPPPGGF---KGGPPPPPPP 373
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPPPXXXXG 781
P PP L PPP P PPPPPPP G
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKG 365
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP P PPPPPPP G
Sbjct: 40 PPPPPPPCGGGYEAPPPPPPPSYAGG 65
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 746 PPPPPPPXXXXG 781
PPPPPPP G
Sbjct: 189 PPPPPPPQNPRG 200
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 725 FFXXXXXPPPPPPP 766
F PPPPPPP
Sbjct: 181 FMTSLQAPPPPPPP 194
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 746 PPPPPPPXXXXG 781
PPPPPPP G
Sbjct: 189 PPPPPPPQNPRG 200
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 725 FFXXXXXPPPPPPP 766
F PPPPPPP
Sbjct: 181 FMTSLQAPPPPPPP 194
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 746 PPPPPPPXXXXG 781
PPPPPPP G
Sbjct: 189 PPPPPPPQNPRG 200
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 725 FFXXXXXPPPPPPP 766
F PPPPPPP
Sbjct: 181 FMTSLQAPPPPPPP 194
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 492 PPPLPPIATPSSVPPPPPPPP 512
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 499 PPPLPPIATPSSVPPPPPPPP 519
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 689 FXXXXPPPXPXXFFXXXXXPPPPPPP 766
F PPP P PPPPPPP
Sbjct: 148 FFFDQPPPTPIPTPVPILEPPPPPPP 173
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP P PPPPPPP G
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGG 588
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP P PPPPPPP G
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLG 587
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPP 763
P PP L PPP P PPPPPP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP P PPPPPPP G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMG 601
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP P PPPPPP G
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP PPPPPPP G
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPPPSGAG 661
Score = 25.0 bits (52), Expect(2) = 2.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 746 PPPPPPPXXXXGI 784
PPPPPPP G+
Sbjct: 610 PPPPPPPPQSFGM 622
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP PPPPPP
Sbjct: 559 PPPTRVESHGLAPARPPPPPP 579
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP P PPPPPP G
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPPXXXXG 781
PPP PPPPPPP G
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPPPSGAG 487
Score = 25.0 bits (52), Expect(2) = 2.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 746 PPPPPPPXXXXGI 784
PPPPPPP G+
Sbjct: 436 PPPPPPPPQSFGM 448
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP PPPPPP
Sbjct: 385 PPPTRVESHGLAPARPPPPPP 405
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPP 144
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPP 1362
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P PPPPPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPP 1363
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPP 763
P PP + PP P F PPPPPP
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
PPP P F PPPPPP
Sbjct: 57 PPPCPAQFCPPPPICPPPPPP 77
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 25.8 bits (54), Expect(2) = 3.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
P P P PPPPPPP
Sbjct: 660 PMPVPPPGGLGGFMPPPPPPP 680
Score = 21.8 bits (44), Expect(2) = 3.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 749 PPPPPPXXXXG 781
PPPPPP G
Sbjct: 674 PPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 25.8 bits (54), Expect(2) = 3.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPPPPPPP 766
P P P PPPPPPP
Sbjct: 660 PMPVPPPGGLGGFMPPPPPPP 680
Score = 21.8 bits (44), Expect(2) = 3.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 749 PPPPPPXXXXG 781
PPPPPP G
Sbjct: 674 PPPPPPPPMPG 684
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 765 GGGGGGGXXXXXKXXXGXGGGXXXXNXXKRXXXXGGXXG 649
GG GGGG + G GGG R GG G
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 780 PXXXXGGGGGGGXXXXXKXXXGXGGGXXXXNXXKRXXXXGGXXG 649
P GGGGGGG G GGG GG G
Sbjct: 782 PTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPP 763
P PP + L PPP P PPPPPP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPPLGII-----PPPPPP 804
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 707 PPXPXXFFXXXXXPPPPPPP 766
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 707 PPXPXXFFXXXXXPPPPPPP 766
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 707 PPXPXXFFXXXXXPPPPPPP 766
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 707 PPXPXXFFXXXXXPPPPPPP 766
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 650 PXXPPXLLXLFXXFXXXXPPPXPXXFFXXXXXPPPPPP 763
P PP + L PPP P PPPPPP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPPLGII-----PPPPPP 804
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +2
Query: 704 PPPXPXXFFXXXXXPP--PPPPPXXXXGI 784
PPP P F P PPPPP GI
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGI 94
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 707 PPXPXXFFXXXXXPPPPPPPXXXXG 781
PP P PPPPPPP G
Sbjct: 41 PPPPPMCGCAPPPPPPPPPPMCGCG 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,954,857
Number of Sequences: 27780
Number of extensions: 187124
Number of successful extensions: 4296
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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