Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F13
         (925 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro...    31   1.7  
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro...    31   1.7  
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro...    31   2.2  
L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprot...    29   9.0  
AY075226-1|AAL68093.1|  495|Drosophila melanogaster AT17674p pro...    29   9.0  
AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p pro...    29   9.0  
AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA...    29   9.0  
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P...    29   9.0  

>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
           protein.
          Length = 1153

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +2

Query: 596 PXPEKXPLLXAFXXRXPPPYXXXKXPPSFHRGETPPGP 709
           P P   P L AF    PPP      PP  + G  PP P
Sbjct: 581 PPPPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPP 618


>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
           protein.
          Length = 1286

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +2

Query: 596 PXPEKXPLLXAFXXRXPPPYXXXKXPPSFHRGETPPGP 709
           P P   P L AF    PPP      PP  + G  PP P
Sbjct: 714 PPPPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPP 751


>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
           protein.
          Length = 1058

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +2

Query: 596 PXPEKXPLLXAFXXRXPPPYXXXKXPPSFHRGETPPGP 709
           P P   P L AF    PPP      PP  + G  PP P
Sbjct: 486 PPPPPPPPLPAFVAPPPPPPPPPPPPPLANYGAPPPPP 523


>L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +2

Query: 551 GXPRXXLLXXGPXXGPXPEKXPLLXAFXXRXPPPYXXXKXPPSFHRGETPPG 706
           G PR  ++   P  G  P   P +     R  PP      PPS  RG  PPG
Sbjct: 146 GVPRAPMMG-APPPGMIPGGMPSMPGNMGRGAPP-PMRGPPPSMIRGAPPPG 195


>AY075226-1|AAL68093.1|  495|Drosophila melanogaster AT17674p
           protein.
          Length = 495

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 634 PXAPPPXXXSXNXTLIPQGGNPPRP 708
           P APPP   S + TL P   +PP P
Sbjct: 163 PKAPPPSTPSSSPTLSPLPSSPPSP 187


>AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p
           protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +2

Query: 551 GXPRXXLLXXGPXXGPXPEKXPLLXAFXXRXPPPYXXXKXPPSFHRGETPPG 706
           G PR  ++   P  G  P   P +     R  PP      PPS  RG  PPG
Sbjct: 146 GVPRAPMMG-APPPGMIPGGMPSMPGNMGRGAPP-PMRGPPPSMIRGAPPPG 195


>AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA
           protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +2

Query: 551 GXPRXXLLXXGPXXGPXPEKXPLLXAFXXRXPPPYXXXKXPPSFHRGETPPG 706
           G PR  ++   P  G  P   P +     R  PP      PPS  RG  PPG
Sbjct: 146 GVPRAPMMG-APPPGMIPGGMPSMPGNMGRGAPP-PMRGPPPSMIRGAPPPG 195


>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
           protein.
          Length = 1317

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 634 PXAPPPXXXSXNXTLIPQGGNPPRP 708
           P APPP   S + TL P   +PP P
Sbjct: 163 PKAPPPSTPSSSPTLSPLPSSPPSP 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,409,360
Number of Sequences: 53049
Number of extensions: 343132
Number of successful extensions: 585
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)