Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F12
(905 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 180 6e-44
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 153 8e-36
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 147 3e-34
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 137 3e-31
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 130 5e-29
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 124 3e-27
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 123 7e-27
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 119 9e-26
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 116 6e-25
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 112 1e-23
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 105 2e-21
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 100 1e-19
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 83 9e-15
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 83 9e-15
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 72 2e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 9e-06
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 47 8e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 43 0.012
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.15
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.20
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 38 0.47
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 2.5
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 4.3
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 5.7
UniRef50_UPI000023EF10 Cluster: hypothetical protein FG10541.1; ... 33 7.6
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 7.6
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 180 bits (437), Expect = 6e-44
Identities = 89/152 (58%), Positives = 107/152 (70%)
Frame = +2
Query: 71 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 250
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 251 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 430
+S+SR+ R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 431 LTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
LTFDQLAL +P G TVL+ G R RE RHF
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHF 152
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/27 (70%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
Frame = +3
Query: 525 FGPAPGAPRSHTKPYVRTKGH--EKAR 599
FG APG P SHTKPYVR+KG E+AR
Sbjct: 152 FGKAPGTPHSHTKPYVRSKGRKFERAR 178
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 153 bits (370), Expect = 8e-36
Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Frame = +2
Query: 71 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 247
MGID K H R RT KS ++ T+A FN++VL+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 248 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 427
P+SVSR+AR +K+ VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 428 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
+T DQLA+RAP G+ T++++G RN+REAVRHF
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHF 153
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 147 bits (357), Expect = 3e-34
Identities = 75/145 (51%), Positives = 100/145 (68%)
Frame = +2
Query: 98 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 277
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 278 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 457
M+ +EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 458 APTGKKTVLVQGQRNAREAVRHFWP 532
P TVL++G +NAREAV+HF P
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGP 149
Score = 46.8 bits (106), Expect = 8e-04
Identities = 21/27 (77%), Positives = 22/27 (81%), Gaps = 2/27 (7%)
Frame = +3
Query: 525 FGPAPGAPRSHTKPYVRTKGH--EKAR 599
FGPAPG P SHTKPYVR+KG EKAR
Sbjct: 147 FGPAPGVPHSHTKPYVRSKGRKFEKAR 173
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 137 bits (332), Expect = 3e-31
Identities = 65/112 (58%), Positives = 88/112 (78%)
Frame = +2
Query: 185 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 364
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 365 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 520
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 130 bits (314), Expect = 5e-29
Identities = 64/114 (56%), Positives = 86/114 (75%)
Frame = +2
Query: 185 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 364
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 365 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF 151
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 124 bits (299), Expect = 3e-27
Identities = 69/152 (45%), Positives = 91/152 (59%)
Frame = +2
Query: 71 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 250
M ID++ H RK + + T +KF + +L RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 251 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 430
+S S+LA MKK E AV V TVT D R Y +PKM V AL T+ A A I AGG+
Sbjct: 61 VSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKC 117
Query: 431 LTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
L FD+LAL+APTG+KTVL++G+RN REA++HF
Sbjct: 118 LRFDELALKAPTGRKTVLIRGKRNVREALKHF 149
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 123 bits (296), Expect = 7e-27
Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
Frame = +2
Query: 47 LFFFLVVKMGIDI-NHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRL 223
LF +++ MGID+ N +K R + S++ T+ FN+I+ +RL
Sbjct: 49 LFSSILINMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRL 108
Query: 224 FMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARA 403
M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M V AL TE AR
Sbjct: 109 IMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARK 166
Query: 404 RILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
RI+ AGGE LTFDQLALR PTGK +L++G AR A +HF
Sbjct: 167 RIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHF 207
Score = 37.1 bits (82), Expect = 0.62
Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +3
Query: 525 FGPAPGAPRSHTKPYVRTKGH--EKAR 599
FG APG P+S +PYVR+KG EKAR
Sbjct: 207 FGSAPGRPKSKARPYVRSKGRKFEKAR 233
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 119 bits (287), Expect = 9e-26
Identities = 63/120 (52%), Positives = 86/120 (71%), Gaps = 6/120 (5%)
Frame = +2
Query: 185 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 346
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 347 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
+IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 116 bits (280), Expect = 6e-25
Identities = 70/158 (44%), Positives = 94/158 (59%), Gaps = 2/158 (1%)
Frame = +2
Query: 59 LVVKMGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMS 232
L ++ G+D K R V R +V S ++ T+++FN VLRRL +
Sbjct: 212 LSIQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSQFNATVLRRLQST 270
Query: 233 RINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARIL 412
R R PISVSRL + + + VVVGTVT+D RL +PK+ V AL TE AR RIL
Sbjct: 271 RTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKLNVCALRFTETARKRIL 330
Query: 413 AAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
AAGG+ LTFDQLA + PTG T+L++G + REA++HF
Sbjct: 331 AAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHF 367
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 112 bits (269), Expect = 1e-23
Identities = 66/153 (43%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Frame = +2
Query: 71 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 247
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 248 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 427
+SVSRLA M K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG
Sbjct: 61 VLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGR 118
Query: 428 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
++FD+L PTG VL+QG+R+ R + F
Sbjct: 119 CMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKF 151
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 105 bits (252), Expect = 2e-21
Identities = 60/114 (52%), Positives = 76/114 (66%)
Frame = +2
Query: 185 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 364
T++ FN VLRRL +R R PISVSRL + + + VVVGTVT+DVRL +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 365 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R RE ++HF
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHF 443
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 99.5 bits (237), Expect = 1e-19
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = +2
Query: 239 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 418
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 419 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 526
GG+ LTFDQLAL +P TVL+ G R RE HF
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHF 188
Score = 34.7 bits (76), Expect = 3.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 525 FGPAPGAPRSHTKPYVRTKGHE 590
F A G P SHTKPYVR+KG +
Sbjct: 188 FDKALGTPHSHTKPYVRSKGRK 209
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 83.0 bits (196), Expect = 9e-15
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = +2
Query: 245 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 424
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 425 EILTFDQLALRAPTGKKTVLVQGQRN 502
+IL+FDQLA+ +P G + QG R+
Sbjct: 107 KILSFDQLAMTSPKGPQK-CYQGYRH 131
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 83.0 bits (196), Expect = 9e-15
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +2
Query: 332 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 511
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 512 AVRHF 526
AV+HF
Sbjct: 185 AVKHF 189
Score = 56.4 bits (130), Expect = 9e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +2
Query: 185 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 364
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 365 TVAALHVT 388
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +2
Query: 71 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 250
+G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 251 ISVSRL 268
+++SR+
Sbjct: 170 LALSRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/113 (34%), Positives = 65/113 (57%)
Frame = +2
Query: 71 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 250
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 251 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 409
+ +SRL R M ++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/113 (34%), Positives = 65/113 (57%)
Frame = +2
Query: 71 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 250
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 251 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 409
+ +SRL R M ++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 53.2 bits (122), Expect = 9e-06
Identities = 28/102 (27%), Positives = 57/102 (55%)
Frame = +2
Query: 194 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 373
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 374 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 499
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 46.8 bits (106), Expect = 8e-04
Identities = 31/116 (26%), Positives = 58/116 (50%)
Frame = -2
Query: 526 KVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLV 347
+V+ + S T +L S+ SQLI+S F++S Q+ +SS+ L
Sbjct: 55 EVSSSFSGSSWTSDDQGVLTLWSSNSQLIQSDGFTTSLQDLSLGTSSESQSSNGGLWEFK 114
Query: 346 QSHVICDCPHYHGNQTLTSWLLHVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 179
S VI + + +++LL +R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 115 DSVVIGNSTNNDNGLLSSTFLLQGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 278 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 457
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 458 APTGKKTVLV 487
P G +V
Sbjct: 112 YPRGSGVRIV 121
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +2
Query: 242 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 421
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 422 GEILTFDQLALRAPTGKKTVLV 487
G + F +L PTGK VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.20
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -3
Query: 426 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 247
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 246 GRLI 235
G LI
Sbjct: 63 GSLI 66
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 37.5 bits (83), Expect = 0.47
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 200 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 376
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 377 LHVTEKARARILAAGGEILTFDQLALRAPTG 469
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 2.5
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 266 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 379
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 34.3 bits (75), Expect = 4.3
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 188 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 364
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 365 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 490
VAA + AR +I AAGGE LT +L P G +++
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 5.7
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +2
Query: 185 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 364
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 365 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 472
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_UPI000023EF10 Cluster: hypothetical protein FG10541.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10541.1 - Gibberella zeae PH-1
Length = 1501
Score = 33.5 bits (73), Expect = 7.6
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 305 IAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI--LTFDQLALRAPTGKKT 478
I +++ T+ VR+ ++ + T V + + AG E+ LTF+ LALR P G +
Sbjct: 360 ITIIMSTLRGLVRVQRLERDTNKLSKVPD------MVAGYELDWLTFE-LALRRPLGNAS 412
Query: 479 VLVQGQRNAREAVRHFWPCSRSTALS 556
+ GQ NA + PC+ A S
Sbjct: 413 FCITGQHNAISSPESGLPCNSQAANS 438
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 7.6
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = +2
Query: 188 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 367
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 368 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 490
VAA ++KA+ +I +AGGE ++ D + P G +++
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,852,802
Number of Sequences: 1657284
Number of extensions: 15388485
Number of successful extensions: 39796
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 38340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39754
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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