Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F12
         (905 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.9  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -3

Query: 372 ATVIFGILYSLTSFVTVPTTTAIKPSRVGFF---MWRAKRDTEIGGRLIRLIKSRRR 211
           +T I  I + +   VTV  T A+K S++  F   M R     +  G  I  ++ +RR
Sbjct: 76  STAILEIAFEVIFIVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRR 132


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 68  KMGIDINHKHDRKV 109
           K+G++INHK D +V
Sbjct: 406 KLGLEINHKEDFRV 419


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -3

Query: 360 FGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDT--EIGGRLIRLIKSRRRTI 205
           F I Y     VT+ T  A + +  G F+W  + D   E  G    L+K+  + I
Sbjct: 322 FWIGYDNEQSVTIKTEYAKEKNLAGVFIWSIETDDMHEFCGEKNGLLKAVNKAI 375


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 537 PGAPRSHTKPYVRTKGHEKARPVVVLMSNFNIRTTH 644
           PG P SH    +  K  ++A   +  +SN  ++ +H
Sbjct: 537 PGGPSSHVSAVLTCKVCDQAFSSLKELSNHMVKNSH 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,902
Number of Sequences: 336
Number of extensions: 3819
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)