Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F10
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   4.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.3  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 592 PIIRASLSVSMICWASKFWSIPLHTVTL 509
           P++  S + SM+C +++ W  P   VTL
Sbjct: 75  PVVSLS-TCSMLCGSTQLWPQPTGPVTL 101


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 282 QPHLPDDWETGPLMTFLRG 338
           +P + D WE GPL    +G
Sbjct: 437 KPDIFDQWELGPLKLSFQG 455


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 246 DPWF*HPPSTPLVWLARVHP 187
           +P F HP   PL W A   P
Sbjct: 53  NPAFFHPGLLPLAWQANSPP 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,647
Number of Sequences: 336
Number of extensions: 4881
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)