Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F10
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.0  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    24   5.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = +2

Query: 509 KGHSVQRYRPKLGCPTNHRYTQTSSYDW*C--KADGGKGR-----SRRRHLCAGRSCSRA 667
           K  + +++ PK+   T H  T ++     C  KA GG G      S  RH+ A R+   A
Sbjct: 267 KHGTARQHSPKIVKKTRHLSTSSADEPDACDRKAPGGGGGGGGKLSSSRHVEAERNARNA 326

Query: 668 QH 673
           QH
Sbjct: 327 QH 328


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 622 ESQETSMCWTQLFSGPAYWQNSLLLPSRNYDL 717
           ES   ++  T L    AY+Q +LL  +  YDL
Sbjct: 226 ESDVKALYTTMLDGAGAYFQRALLTGANRYDL 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 905,033
Number of Sequences: 2352
Number of extensions: 20047
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)