Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F09
         (922 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep: CG90...    60   8e-08
UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q9W380 Cluster: CG9034-PA; n=5; Endopterygota|Rep:
           CG9034-PA - Drosophila melanogaster (Fruit fly)
          Length = 77

 Score = 60.1 bits (139), Expect = 8e-08
 Identities = 28/74 (37%), Positives = 39/74 (52%)
 Frame = +2

Query: 77  MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 256
           M+A++ +    L+++ WNEIP+I   +               NY   DGDNRRYK  YVV
Sbjct: 1   MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60

Query: 257 MRPDDPRVKLIRKE 298
            R DDPR   +R +
Sbjct: 61  YRHDDPRALKVRND 74


>UniRef50_A5AJ56 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 418

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +1

Query: 193 WSIQLREERWRQ*KVQGYLCGDEAGRPKSEAYTQGVNLKLNILPVLFV 336
           W+I    E W + KV  +  GDE GR   EAY Q   LKL     LF+
Sbjct: 34  WTINFDYEAWAKDKV--FHVGDELGRDAEEAYIQRTPLKLQ-FETLFI 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,287,145
Number of Sequences: 1657284
Number of extensions: 10676771
Number of successful extensions: 20276
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20221
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)