Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F09
         (922 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   4.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   5.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 277 SEAYTQGVNLKLNILPVLFVL 339
           S  + +G+N KLN L V+F+L
Sbjct: 125 SYGWPKGLNKKLNTLTVVFML 145


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 277 SEAYTQGVNLKLNILPVLFVL 339
           S  + +G+N KLN L V+F+L
Sbjct: 125 SYGWPKGLNKKLNTLTVVFML 145


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 197 AYNYVKNDGDNRRYKGTYVVMRPDD 271
           A  +++  GD  + KGTY    PD+
Sbjct: 347 AGKHLRKVGDPSKRKGTYAFRTPDE 371


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 203 NYVKNDGDNRRYKGTYVVMRPDDPRVKLIRKE 298
           +YV+ D D RR+     ++ P+  ++KL   E
Sbjct: 146 DYVERDTDIRRFLIKVTILHPNIVKLKLDTSE 177


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 142 NFCLNRLRSCWYWSGCSWSIQLREERWRQ*KVQGYL 249
           N C +   S  Y+ GC  S+ L EE  +  K+  YL
Sbjct: 83  NLCRSECFSTKYFVGCVESLLLSEEMPKFRKMIEYL 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,125
Number of Sequences: 336
Number of extensions: 2521
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)