Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F09
         (922 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071733-1|AAL49355.1|   77|Drosophila melanogaster RH45008p pro...    60   4e-09
AE014298-1291|AAF46455.1|   77|Drosophila melanogaster CG9034-PA...    60   4e-09

>AY071733-1|AAL49355.1|   77|Drosophila melanogaster RH45008p
           protein.
          Length = 77

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 28/74 (37%), Positives = 39/74 (52%)
 Frame = +2

Query: 77  MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 256
           M+A++ +    L+++ WNEIP+I   +               NY   DGDNRRYK  YVV
Sbjct: 1   MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60

Query: 257 MRPDDPRVKLIRKE 298
            R DDPR   +R +
Sbjct: 61  YRHDDPRALKVRND 74


>AE014298-1291|AAF46455.1|   77|Drosophila melanogaster CG9034-PA
           protein.
          Length = 77

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 28/74 (37%), Positives = 39/74 (52%)
 Frame = +2

Query: 77  MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 256
           M+A++ +    L+++ WNEIP+I   +               NY   DGDNRRYK  YVV
Sbjct: 1   MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60

Query: 257 MRPDDPRVKLIRKE 298
            R DDPR   +R +
Sbjct: 61  YRHDDPRALKVRND 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,999,353
Number of Sequences: 53049
Number of extensions: 522524
Number of successful extensions: 1114
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)