Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F08
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 52 1e-07
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 3e-05
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 35 0.011
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.14
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 1.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 5.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 6.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 9.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 51.6 bits (118), Expect = 1e-07
Identities = 40/163 (24%), Positives = 42/163 (25%), Gaps = 6/163 (3%)
Frame = +1
Query: 298 PPPPPPXXXXXXXXXXXXXXXXXXXXXPXPPXKKXXPGGXGVXFFXXXXPPPPPPXXXXG 477
PPPPPP P PP + G + PPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 478 XGGPPPPPXXXXXXXPARXPXXXXP----PPPPPRXXGXGXXXXPXXXXXXXXPPXPP-- 639
G PPP P P P PP P P PP
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL 431
Query: 640 PPPXXPXXTXXXXXAXXXXPSXXXXXPXPXXPXXXXXXPPXPP 768
PP P A PS P P PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 44.4 bits (100), Expect = 2e-05
Identities = 33/121 (27%), Positives = 34/121 (28%), Gaps = 1/121 (0%)
Frame = +3
Query: 297 PPPPPPPXXXXFFFXXXGGGGGGGXXXPPPPXKKXPXRGXGGXFFFXXXXPPPPPXXXXG 476
PPPPPPP G G PPPP + G PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 477 XGXPPPPPXXXXXXXPXXXPXXXXXPPPPPPXXGXGXXXXPXXXXXXXXXXXP-PPPPXX 653
PPP P PPP G P P P PP
Sbjct: 371 STGRQPPPLSSSR-------AVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 654 P 656
P
Sbjct: 424 P 424
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/71 (35%), Positives = 25/71 (35%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXX 624
PPPPPP G PP P PPPPPPR G P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP--------PPPPPPRSNAAGSIPLP---PQGRS 359
Query: 625 PPXPPPPPXXP 657
P PPPP P
Sbjct: 360 APPPPPPRSAP 370
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 487 PPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXXPPXPPPP 645
P PPP PPPPPP G PP PPPP
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 31.5 bits (68), Expect = 0.14
Identities = 33/140 (23%), Positives = 34/140 (24%), Gaps = 10/140 (7%)
Frame = +1
Query: 379 PXPPXKKXXPGGXGVXFFXXXXPPPPPPXXXXGXGGPP---PPPXXXXXXXPARXPXXXX 549
P PP V PPP PP PP P P PA
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 550 PPPPPPRXXGXGXXXXPXXXXXXXXPPXPPP-------PPXXPXXTXXXXXAXXXXPSXX 708
P PPP PP PPP PP + P
Sbjct: 291 PLPPPSSRVSAA----ALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Query: 709 XXXPXPXXPXXXXXXPPXPP 768
P P PP PP
Sbjct: 347 AAGSIPLPPQGRSAPPPPPP 366
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXX 624
PP PP PP P PA P P PP G P
Sbjct: 420 PPSLPPSAPPSL--PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM-PAAPPLPPAAPAP 476
Query: 625 PPXPPPPPXXP 657
PP P P P P
Sbjct: 477 PPAPAPAPAAP 487
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 487 PPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXXPPXPPPPPXXP 657
PP PP P R P P PPP P PP PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPP---------IPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.9 bits (59), Expect = 1.7
Identities = 25/120 (20%), Positives = 27/120 (22%)
Frame = +1
Query: 298 PPPPPPXXXXXXXXXXXXXXXXXXXXXPXPPXKKXXPGGXGVXFFXXXXPPPPPPXXXXG 477
PPPPP P PP + PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 478 XGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXXPPXPPPPPXXP 657
P PP P+ PP PP P PP PP P P
Sbjct: 422 SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS----APIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +3
Query: 486 PPPPPXXXXXXXPXXXPXXXXXPPPPPPXXGXGXXXXP 599
PP PP P P PPP P G P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP 267
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/68 (38%), Positives = 26/68 (38%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXX 624
PPPPPP P P P PA PPPPPP G G
Sbjct: 732 PPPPPPAVIV----PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG------------P 775
Query: 625 PPXPPPPP 648
PP PPPPP
Sbjct: 776 PPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.006
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 448 PPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXG 585
P PPP G PPPPP P PPPPPP G
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPP------PPPPPPPAVSAGG 789
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 296 SPPPPPPXXXXXXXXXXXXXXXXXXXXPPXPXKKXPXPGGGGXFFFXXXXPPPPPPXXXX 475
SPPPPPP P P PG G PPPPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA---GPPPPPPPPPAVSA 787
Query: 476 GG 481
GG
Sbjct: 788 GG 789
Score = 34.7 bits (76), Expect = 0.015
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 486 PPPPPXXXXXXXPXXXPXXXXXPPPPPPXXGXGXXXXPXXXXXXXXXXXPPPPPXXP 656
PPPPP P P P PPP G P PPPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.42
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 625 PPXPPPPPXXPXXTXXXXXAXXXXPSXXXXXPXPXXPXXXXXXPPXPP 768
PP PPP P P P P P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +3
Query: 297 PPPPPPPXXXXFFFXXXGGGGGGGXXXPPPPXKKXPXRGXGGXFFFXXXXPPPPP 461
PPPPPPP G G PPPP G ++ P P
Sbjct: 761 PPPPPPPP------------GVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 35.1 bits (77), Expect = 0.011
Identities = 27/109 (24%), Positives = 27/109 (24%), Gaps = 3/109 (2%)
Frame = +3
Query: 447 PPPPPXXXXGXGXPPPP---PXXXXXXXPXXXPXXXXXPPPPPPXXGXGXXXXPXXXXXX 617
PPPP G PPPP P PPPP G P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 618 XXXXXPPPPPXXPXXNXXXXXGXXXRPLXXXXXPXPXXXXXXXXXPPPP 764
PPPP P P P PPPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEP-GEHMPPPPMHHEPGEHMPPPP 315
Score = 34.3 bits (75), Expect = 0.020
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Frame = +1
Query: 448 PPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPP---PPPPRXXGXGXXXXPXXXXXX 618
PPPP G PPPP P P PPPP G P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 319
Query: 619 XXPPXPPPP 645
PPPP
Sbjct: 320 PGEHMPPPP 328
Score = 34.3 bits (75), Expect = 0.020
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Frame = +1
Query: 448 PPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPP---PPPPRXXGXGXXXXPXXXXXX 618
PPPP G PPPP P P PPPP G P
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 332
Query: 619 XXPPXPPPP 645
PPPP
Sbjct: 333 PGEHMPPPP 341
Score = 33.5 bits (73), Expect = 0.034
Identities = 26/96 (27%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Frame = +3
Query: 366 GXXXPPPPXKKXPXRGXGGXFFFXXXXPPPPPXXXXGXGXPPPP---PXXXXXXXPXXXP 536
G PPPP P PPPP G PPPP P
Sbjct: 243 GEHMPPPPMHHEPGE----------HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 292
Query: 537 XXXXXPPPPPPXXGXGXXXXPXXXXXXXXXXXPPPP 644
PPPP G P PPPP
Sbjct: 293 EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 33.5 bits (73), Expect = 0.034
Identities = 26/96 (27%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Frame = +3
Query: 366 GXXXPPPPXKKXPXRGXGGXFFFXXXXPPPPPXXXXGXGXPPPP---PXXXXXXXPXXXP 536
G PPPP P PPPP G PPPP P
Sbjct: 256 GEHMPPPPMHHEPGE----------HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 305
Query: 537 XXXXXPPPPPPXXGXGXXXXPXXXXXXXXXXXPPPP 644
PPPP G P PPPP
Sbjct: 306 EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 481 GGPPPPPXXXXXXXPARXPXXXXPPPPPP 567
G PPPPP P P PPPPPP
Sbjct: 7 GNPPPPPPP-----PGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.14
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPP 501
PPPPPP PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.24
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPP 501
PPPPPP PPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 480 GXPPPPPXXXXXXXPXXXPXXXXXPPPPP 566
G PPPPP P P PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPP-----PPPPP 30
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPP 501
PPPPPP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPP 501
PPPPP PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.14
Identities = 25/98 (25%), Positives = 25/98 (25%), Gaps = 4/98 (4%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPP----PRXXGXGXXXXPXXXX 612
PP P P G PP P P P P P P P P
Sbjct: 1131 PPVPVP------SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Query: 613 XXXXPPXPPPPPXXPXXTXXXXXAXXXXPSXXXXXPXP 726
PP PPP P PS P P
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 29.9 bits (64), Expect = 0.42
Identities = 24/110 (21%), Positives = 24/110 (21%), Gaps = 3/110 (2%)
Frame = +1
Query: 448 PPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPP---PRXXGXGXXXXPXXXXXX 618
PP P PPP P P P P P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 619 XXPPXPPPPPXXPXXTXXXXXAXXXXPSXXXXXPXPXXPXXXXXXPPXPP 768
PP P P P PS P P P P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 29.1 bits (62), Expect = 0.74
Identities = 26/95 (27%), Positives = 26/95 (27%), Gaps = 4/95 (4%)
Frame = +1
Query: 385 PPXKKXXPGGXGVXFFXXXXPPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPP 564
PP K V PP P P G PP PP P P PP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKP----AAGVPPVPPPSEAPPVPK--PSVGVPPVPP 1212
Query: 565 PRXXGX----GXXXXPXXXXXXXXPPXPPPPPXXP 657
P P PP P P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/108 (25%), Positives = 27/108 (25%), Gaps = 1/108 (0%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXX 624
PP P P G PP P P P PP P P G P
Sbjct: 1083 PPVPAP------SGIPPVPKPSVAAPPVPKPSVAVPPVPAP--SGAPPVPKPSVAAPPVP 1134
Query: 625 PPXPPPPPXXPXXTXXXXXAXXXXPS-XXXXXPXPXXPXXXXXXPPXP 765
P PP P A P P P PP P
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/94 (23%), Positives = 22/94 (23%), Gaps = 2/94 (2%)
Frame = +1
Query: 490 PPPPXXXXXXXPARXPXXXXPPPPPPRXXGXG--XXXXPXXXXXXXXPPXPPPPPXXPXX 663
PP P P P PP P P P P PPP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 664 TXXXXXAXXXXPSXXXXXPXPXXPXXXXXXPPXP 765
A P P P PP P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/64 (25%), Positives = 17/64 (26%)
Frame = +1
Query: 379 PXPPXKKXXPGGXGVXFFXXXXPPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPP 558
P PP + P PP P G PP P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSV 1249
Query: 559 PPPR 570
PR
Sbjct: 1250 STPR 1253
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.24
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 656 GXXGGGGGXGGXXXXXXXXGXXXXPXPXXRGGGGGGXXXXGXRAGXXXXXXXGGGGGP 483
G GG GG G G GG GGG G G G GGGP
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 29.9 bits (64), Expect = 0.42
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -1
Query: 656 GXXGGGGGXGGXXXXXXXXGXXXXPXPXXRGGGGGGXXXXGXRAGXXXXXXXGGGGGPPX 477
G G GGG GG G GG G G G G GGGP
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGFGGGPGG 246
Query: 476 PXXXXGGGGGG 444
GG GGG
Sbjct: 247 FGGGLGGFGGG 257
Score = 28.7 bits (61), Expect = 0.98
Identities = 25/70 (35%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = -1
Query: 641 GGGXGGXXXXXXXXGXXXXPXPXXRGGGG-GGXXXXGXRAGXXXXXXXGGGG---GPPXP 474
GGG GG G P P G GG GG G G G GG GP
Sbjct: 187 GGGFGGFG------GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 473 XXXXGGGGGG 444
GG GGG
Sbjct: 241 GGGPGGFGGG 250
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -1
Query: 656 GXXGGGGGXGGXXXXXXXXGXXXXPXPXXRGGGGGGXXXXGXRAGXXXXXXXGGGGGPPX 477
G GG GG GG G GGG GG G GG GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGF--------GGGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256
Query: 476 PXXXXGGGGGG 444
GGG GG
Sbjct: 257 GPGGFGGGPGG 267
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 536 GXRAGXXXXXXXGGGGGPPXPXXXXGGGGGG 444
G G G GG PP P G GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFG 214
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 625 PPXPPPPP 648
PP PPPPP
Sbjct: 945 PPPPPPPP 952
Score = 22.6 bits (46), Expect(2) = 1.7
Identities = 13/44 (29%), Positives = 13/44 (29%), Gaps = 3/44 (6%)
Frame = +1
Query: 445 PPPPPP---XXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPP 567
PPPPPP P PPPPPP
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPP 950
Score = 22.2 bits (45), Expect(2) = 7.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 535 PXXXXPPPPPP 567
P PPPPPP
Sbjct: 942 PAFPPPPPPPP 952
Score = 21.4 bits (43), Expect(2) = 7.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 550 PPPPPPRXXGXG 585
PPPPPP G
Sbjct: 948 PPPPPPLVSAAG 959
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 448 PPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPP 567
PPPPP PP P P P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 486 PPPPPXXXXXXXPXXXPXXXXXPP--PPPP 569
P PPP P P PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 526 ARXPXXXXP-PPPPPRXXGXGXXXXPXXXXXXXXPPXPPPPP 648
A P P PPPPP P PP PPPP
Sbjct: 1697 AAPPQMSAPTPPPPPM----SVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.4 bits (48), Expect(2) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 625 PPXPPPPP 648
PP PPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 22.2 bits (45), Expect(2) = 2.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 535 PXXXXPPPPPP 567
P PPPPPP
Sbjct: 1091 PSAVPPPPPPP 1101
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 445 PPPPPPXXXXGXGGPPPP 498
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/83 (21%), Positives = 18/83 (21%)
Frame = +1
Query: 487 PPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXXPPXPPPPPXXPXXT 666
P PP P P PPP P P P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 667 XXXXXAXXXXPSXXXXXPXPXXP 735
A P P P
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/78 (24%), Positives = 22/78 (28%), Gaps = 7/78 (8%)
Frame = +1
Query: 445 PPPPPP--XXXXGXGGP-----PPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPX 603
P PP P P PPP P++ P PPP +
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 604 XXXXXXXPPXPPPPPXXP 657
PP PP P P
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 379 PXPPXKKXXPGGXGVXFFXXXXPPPPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPP 558
P PP PG G+ PP PP G P P P P PP
Sbjct: 504 PLPPI----PGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPPG 559
Query: 559 PP 564
P
Sbjct: 560 AP 561
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = -1
Query: 656 GXXGG-GGGXGGXXXXXXXXGXXXXPXPXXRGGG-GGGXXXXGXRAGXXXXXXXGGGG 489
G GG GG GG G RGGG GG G R G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 569 RGGGGGGXXXXGXRAGXXXXXXXGGGGGPPXPXXXXGGGGGG 444
RGG GG G G GG GG GG GG
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 569 RGGGGGGXXXXGXRAGXXXXXXXGGGGGPPXPXXXXGGGGGGXXXKK 429
RGG GGG G G GG GG GG GG K
Sbjct: 25 RGGFGGGR---GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = -2
Query: 568 GGGGGGXXXXXGXXXGXXXXXXXGGGGGXPXPXXXXGG-GGGXXXXKKKXPPXPRXGXFF 392
GG GGG G G G GG GG GG K P G F
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEPHRHAGVFI 85
Query: 391 XGG 383
G
Sbjct: 86 ARG 88
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 625 PPXPPPPP 648
PP PPPPP
Sbjct: 307 PPPPPPPP 314
Score = 21.0 bits (42), Expect(2) = 5.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 550 PPPPPP 567
PPPPPP
Sbjct: 306 PPPPPP 311
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 578 PXXRGGGGGGXXXXGXRAGXXXXXXXGGGGGPPXPXXXXGGGGG 447
P RGG GG G G GG GG G GG
Sbjct: 134 PAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 9.1
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +1
Query: 451 PPPPXXXXGXGGPPPPPXXXXXXXPARXPXXXXPPPPPPRXXGXGXXXXPXXXXXXXXPP 630
PPPP PPPPP A P P PP
Sbjct: 189 PPPP--------PPPPPAVEDQAADANEPDDYYSSGRAVSPE-IPPTYTPKQADPLPAPP 239
Query: 631 XPPPPPXXPXXT 666
PPPP P T
Sbjct: 240 PPPPPTLPPQST 251
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +1
Query: 487 PPPPPXXXXXXXPARXPXXXXPPPPPP 567
PPPP P+ P PP PP
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.156 0.580
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,897,150
Number of Sequences: 5004
Number of extensions: 43712
Number of successful extensions: 743
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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