Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F07
         (1396 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008207-1|AAH08207.1|  494|Homo sapiens hypothetical protein BC...    27   7.3  

>BC008207-1|AAH08207.1|  494|Homo sapiens hypothetical protein
           BC008207 protein.
          Length = 494

 Score = 26.6 bits (56), Expect(2) = 7.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 6   PXPPPPPXLXPXP 44
           P PPPPP L P P
Sbjct: 469 PPPPPPPPLPPPP 481



 Score = 23.4 bits (48), Expect(2) = 7.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 3   PPXPPPPP 26
           PP PPPPP
Sbjct: 438 PPPPPPPP 445


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,131,115
Number of Sequences: 237096
Number of extensions: 486130
Number of successful extensions: 9237
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6540
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20334188714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)