Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F07
         (1396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095075-1|AAM11403.1|  295|Drosophila melanogaster RE24507p pro...    27   2.9  
AE014296-853|AAF47905.2|  295|Drosophila melanogaster CG15022-PA...    27   2.9  
BT015257-1|AAT94486.1|  988|Drosophila melanogaster LP04173p pro...    25   5.7  
AE014296-443|AAF47637.2|  988|Drosophila melanogaster CG1317-PB ...    25   5.7  
AY058479-1|AAL13708.1|  700|Drosophila melanogaster GH28722p pro...    25   5.8  

>AY095075-1|AAM11403.1|  295|Drosophila melanogaster RE24507p
           protein.
          Length = 295

 Score = 26.6 bits (56), Expect(2) = 2.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   PXPPPPPXLXPXPXXVXXXP 65
           P PPPPP + P P  +   P
Sbjct: 154 PPPPPPPVVAPKPTYLPPSP 173



 Score = 23.4 bits (48), Expect(2) = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 3   PPXPPPPP 26
           PP PPPPP
Sbjct: 114 PPPPPPPP 121


>AE014296-853|AAF47905.2|  295|Drosophila melanogaster CG15022-PA
           protein.
          Length = 295

 Score = 26.6 bits (56), Expect(2) = 2.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   PXPPPPPXLXPXPXXVXXXP 65
           P PPPPP + P P  +   P
Sbjct: 154 PPPPPPPVVAPKPTYLPPSP 173



 Score = 23.4 bits (48), Expect(2) = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 3   PPXPPPPP 26
           PP PPPPP
Sbjct: 114 PPPPPPPP 121


>BT015257-1|AAT94486.1|  988|Drosophila melanogaster LP04173p
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect(2) = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 6   PXPPPPPXLXPXP 44
           P PPPPP + P P
Sbjct: 598 PPPPPPPPVEPAP 610



 Score = 23.4 bits (48), Expect(2) = 5.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 3   PPXPPPPP 26
           PP PPPPP
Sbjct: 595 PPAPPPPP 602


>AE014296-443|AAF47637.2|  988|Drosophila melanogaster CG1317-PB
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect(2) = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 6   PXPPPPPXLXPXP 44
           P PPPPP + P P
Sbjct: 598 PPPPPPPPVEPAP 610



 Score = 23.4 bits (48), Expect(2) = 5.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 3   PPXPPPPP 26
           PP PPPPP
Sbjct: 595 PPAPPPPP 602


>AY058479-1|AAL13708.1|  700|Drosophila melanogaster GH28722p
           protein.
          Length = 700

 Score = 25.4 bits (53), Expect(2) = 5.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 6   PXPPPPPXLXPXP 44
           P PPPPP + P P
Sbjct: 310 PPPPPPPPVEPAP 322



 Score = 23.4 bits (48), Expect(2) = 5.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 3   PPXPPPPP 26
           PP PPPPP
Sbjct: 307 PPAPPPPP 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,905,469
Number of Sequences: 53049
Number of extensions: 139062
Number of successful extensions: 2782
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1976
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7640341056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)