Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_F04
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 765 PPPPPKKXPXXPPP 806
           PP PP   P  PPP
Sbjct: 582 PPAPPPPPPMGPPP 595



 Score = 23.8 bits (49), Expect = 7.3
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 760 PXPPPPQKNXPXXPPLXG 813
           P PPPP    P   PL G
Sbjct: 583 PAPPPPPPMGPPPSPLAG 600


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +1

Query: 730 GPPPGGXXKXPXPPPPQKNXPXXP 801
           GPP  G    P PP P    P  P
Sbjct: 199 GPPRTGTPTQPQPPRPGGMYPQPP 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,329
Number of Sequences: 2352
Number of extensions: 5271
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)