Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F03
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28991-4|AAK68310.1| 227|Caenorhabditis elegans Hypothetical pr... 253 1e-67
AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine r... 31 1.1
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 30 2.0
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 30 2.0
U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U28991-4|AAK68310.1| 227|Caenorhabditis elegans Hypothetical
protein F08F8.7 protein.
Length = 227
Score = 253 bits (620), Expect = 1e-67
Identities = 125/223 (56%), Positives = 157/223 (70%), Gaps = 4/223 (1%)
Frame = +2
Query: 149 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI- 325
L+ + PSILNADL+ L E +KLL GAD+LHLDVMDG FVPNLTFGHPVV+ LR +
Sbjct: 3 LRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKSLG 62
Query: 326 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD---VIEVCRKVREHGMKVGVAI 496
+ FF+ H+MV P QW+ PMA AG +Q+TFH E V V E+ K+R+ GMKVG+++
Sbjct: 63 AEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGLSV 122
Query: 497 KPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVG 676
KPGT V + K+ + D LIMTVEPGFGGQKFMEN M KV+ +R YP L I+VDGGV
Sbjct: 123 KPGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRSKYPNLTIQVDGGVT 182
Query: 677 PSTINCCANAGANMIVSGTAIIGSADQAATIKLLRSTVQDAIN 805
P I A AGAN IVSGT II +ADQ+ + +R+ V+ AI+
Sbjct: 183 PENIEISAQAGANAIVSGTGIIKAADQSVAMTTIRNAVEAAIS 225
>AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 56 protein.
Length = 321
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 582 PNPGSTVIIKTMSDIEIYFSTSE-TGVPGFIATPTFIPCSLTFLH 451
P+P + II +M +EI FS TG F P+FI S+ FLH
Sbjct: 5 PSPPAP-IITSMETVEIEFSAKVFTGFQLFYGVPSFIIMSVLFLH 48
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 1391 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 1443
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 2104 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 2156
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 1140 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 1192
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 1391 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 1443
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 2104 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 2156
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 1411 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 1463
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +2
Query: 665 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQDAI 802
G GP T++CC+ AG + +II D T+KLLR+ Q+ I
Sbjct: 2124 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQNMI 2176
>U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical
protein EGAP9.3 protein.
Length = 354
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 599 ENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKL 775
+N++ K +YL +P+ I DGG+G + G M ++ TAI S D KL
Sbjct: 51 KNEIDKQKYLL--FPMTAIVFDGGLGNQLFEVFSLLGLAMKLNRTAIFNSDDWILHSKL 107
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 753 SADPIMAVPETIMLAPALAQQFIVDGPTPPSTSISSNG*FSLKYCTLAI*FS 598
++ I ++PETI P+L ++ D P +S S N LK L FS
Sbjct: 488 TSSAITSIPETITKLPSLTHLYLSDNPLDQLSSTSLNHLDGLKKIRLGGNFS 539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,641,139
Number of Sequences: 27780
Number of extensions: 421746
Number of successful extensions: 1103
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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