Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F02
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 313 3e-86
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 263 2e-71
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 166 3e-42
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 147 2e-36
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 130 3e-31
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 123 3e-29
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 123 4e-29
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 121 1e-28
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 116 3e-27
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 114 1e-26
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 114 2e-26
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 112 6e-26
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 111 1e-25
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 107 2e-24
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 102 8e-23
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 98 1e-21
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 93 4e-20
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 93 7e-20
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 88 2e-18
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 83 5e-17
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 76 6e-15
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 71 3e-13
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 68 2e-12
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 44 3e-05
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 34 0.024
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 30 0.52
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 29 0.69
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 1.2
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 2.1
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 2.8
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 3.7
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 27 4.8
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 27 4.8
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 26 6.4
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 26 6.4
SPAC4H3.13 |||transcription factor Pcc1 |Schizosaccharomyces pom... 26 8.5
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 26 8.5
SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces p... 26 8.5
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 313 bits (768), Expect = 3e-86
Identities = 144/198 (72%), Positives = 178/198 (89%)
Frame = +3
Query: 174 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 353
++ ++T++D+V++TFDDMNLK ELLRGIYAYGFE+PSAIQQRAIMP + RDV+AQAQ
Sbjct: 5 LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQ 64
Query: 354 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 533
SGTGKTATFSIS+LQ+IDTS+++CQALILAPTRELAQQIQKVV+ALGD +N +CHACIGG
Sbjct: 65 SGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGG 124
Query: 534 TNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHD 713
T VR+D+ L++GVHVVVGTPGRV+DMI RRAL + +++FVLDEADEMLSRGFKDQI+D
Sbjct: 125 TLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYD 184
Query: 714 VFKMLSADVQVILLSATM 767
+F++L QV+LLSATM
Sbjct: 185 IFQLLPPTAQVVLLSATM 202
Score = 48.8 bits (111), Expect = 1e-06
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +1
Query: 769 PDDVLEVSRCFMRDPVRILVQKEELTLERY*QF 867
P DVLEV+ FMRDP+RILV+K+ELTLE QF
Sbjct: 203 PQDVLEVTTKFMRDPIRILVKKDELTLEGIKQF 235
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 263 bits (645), Expect = 2e-71
Identities = 125/199 (62%), Positives = 159/199 (79%), Gaps = 1/199 (0%)
Frame = +3
Query: 174 MDPGTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 350
M+ L T D V +F++MNLKE+LLRGIYAYG+E PSA+Q RAI+ +GRDVIAQA
Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQA 65
Query: 351 QSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 530
QSGTGKTATFSI ILQ ID S+R+ QALIL+PTRELA QIQ VV+ALGDH+N +CHACIG
Sbjct: 66 QSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIG 125
Query: 531 GTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIH 710
GT+V DI++L+ G HVV GTPGRV DMI RR L +K+ +LDEADE+L++GFK+QI+
Sbjct: 126 GTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIY 185
Query: 711 DVFKMLSADVQVILLSATM 767
D+++ L QV+++SAT+
Sbjct: 186 DIYRYLPPGTQVVVVSATL 204
Score = 39.1 bits (87), Expect = 8e-04
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +1
Query: 769 PDDVLEVSRCFMRDPVRILVQKEELTLERY*QF 867
P DVLE++ F +PVRILV+++ELTLE Q+
Sbjct: 205 PQDVLEMTNKFTTNPVRILVKRDELTLEGLKQY 237
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 166 bits (404), Expect = 3e-42
Identities = 90/217 (41%), Positives = 126/217 (58%), Gaps = 4/217 (1%)
Frame = +3
Query: 126 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGIYAYGFEKPSA 293
+N D+ S+ G P + + V +T F+D LK ELL GI+ GFE+PS
Sbjct: 10 ENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSP 69
Query: 294 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 473
IQ+ +I + GRD++A+A++GTGKTA F I L+++DT + Q LIL PTRELA Q
Sbjct: 70 IQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTS 129
Query: 474 KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKL 653
+V LG H+N K GGT +R+DI +L VH+VVGTPGRV D+ + +
Sbjct: 130 QVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTT 189
Query: 654 FVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 764
FV+DEAD++LS F I + + Q+ L SAT
Sbjct: 190 FVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSAT 226
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 147 bits (356), Expect = 2e-36
Identities = 78/188 (41%), Positives = 123/188 (65%), Gaps = 4/188 (2%)
Frame = +3
Query: 213 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 386
V++F+++ LK ELL+GIY+ F+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFAL 172
Query: 387 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI-RQL 563
++L ++D S+ + QA+ LAP+RELA+QI VV +G + K +++ + +
Sbjct: 173 TMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVKT-----AFGIKDSVPKGA 227
Query: 564 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADV 740
+ +V+GTPG V D++ RR L A IK+FVLDEAD ML +G DQ + +L +
Sbjct: 228 KIDAQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNT 287
Query: 741 QVILLSAT 764
Q++L SAT
Sbjct: 288 QIVLFSAT 295
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 130 bits (314), Expect = 3e-31
Identities = 76/187 (40%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Frame = +3
Query: 222 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 401
F D LK ELLR I GFE PS +QQ I I G DV+ QA+SG GKTA F +S LQQ
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQ 112
Query: 402 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDI---RQLES 569
I+ E L+L TRELA QI+ +L + + GG N+++D+ +
Sbjct: 113 IEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSK 172
Query: 570 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQV 746
H+VV TPGR+ ++ + L N++K FVLDE D++L S + I +VF+ QV
Sbjct: 173 SPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQV 232
Query: 747 ILLSATM 767
++ SAT+
Sbjct: 233 MMFSATL 239
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 123 bits (297), Expect = 3e-29
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Frame = +3
Query: 219 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 398
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 399 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 569
++ + + LIL PTRELA Q V + + CIGG +++ ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 570 GVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 746
+V+ TPGR D M + I++ V+DEAD ML GF D+++++ + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 747 ILLSATM 767
+L SATM
Sbjct: 440 MLFSATM 446
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 123 bits (296), Expect = 4e-29
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Frame = +3
Query: 222 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 401
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 402 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 575
+ +++ +ALIL+P RELA Q KVV + + A +GG ++ E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 576 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 755
+VV TPGR + L ++I+ V DEAD + GF Q+ ++ L Q +L
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 756 SATM 767
SAT+
Sbjct: 251 SATL 254
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 121 bits (292), Expect = 1e-28
Identities = 71/231 (30%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Frame = +3
Query: 78 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 257
M+ S ++ +ED S N + S + D+ ++ +TF ++ + +EL
Sbjct: 1 MAPSEKKLTEDKKNSSLNKKIETSNS-SSEKSSENNNGDSQNNEAPKTFKELGVIDELCE 59
Query: 258 GIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALI 437
GF+ P+ IQQ AI + RDVI AQ+G+GKTA F++ ++Q++ + A++
Sbjct: 60 ACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVV 119
Query: 438 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 617
LAPTRELA QI + A+G + + +GG ++ L HV+V TPGR+ D +
Sbjct: 120 LAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHL 179
Query: 618 -TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 767
+ +K ++DEAD +L F I + K++ + + +L SATM
Sbjct: 180 ENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATM 230
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 116 bits (280), Expect = 3e-27
Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 6/190 (3%)
Frame = +3
Query: 216 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 395
++F D+ + L+ + A +P+ IQ+ I ++GR+ I A++G+GKTA F++ I+
Sbjct: 7 KSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPII 66
Query: 396 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 575
++ ALIL PTRELA QI + ALG +LN K +GG ++ L
Sbjct: 67 EKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRP 126
Query: 576 HVVVGTPGRVYDMITRRALHA----NTIKLFVLDEADEMLSRGFKDQIHDVFKML--SAD 737
HVVV TPGR+ D+I IK V+DEAD +LS F D + D F +L S D
Sbjct: 127 HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASED 186
Query: 738 VQVILLSATM 767
Q +L +AT+
Sbjct: 187 RQTLLFTATV 196
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 114 bits (275), Expect = 1e-26
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Frame = +3
Query: 213 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---S 383
+E F D+ L E + + I GFE + IQ+R+I P + GRDV+ A++G+GKT F +
Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPT 147
Query: 384 ISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 560
I +L + R +I++PTRELA QI V L + + IGG N R + +
Sbjct: 148 IEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADK 207
Query: 561 LESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML-SA 734
L GV+++V TPGR+ D + + ++ V+DEAD +L GF+D++ + K+L S
Sbjct: 208 LVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSE 267
Query: 735 DVQVILLSAT 764
+ Q +L SAT
Sbjct: 268 NRQTLLFSAT 277
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 114 bits (274), Expect = 2e-26
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Frame = +3
Query: 198 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 377
D + +++ L E+L+ + +++PS+IQ+ AI +Q +D+I A++G+GKTA
Sbjct: 243 DLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAA 302
Query: 378 FSISILQQIDT--SIRECQ------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 533
F I ++ I + E A++LAPTRELAQQIQ + L +C + +GG
Sbjct: 303 FIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGG 362
Query: 534 TNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHD 713
E Q+ G H+VV TPGR+ D + RR + V+DEAD ML GF+D ++
Sbjct: 363 HAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNK 422
Query: 714 VFKML 728
+ L
Sbjct: 423 ILSSL 427
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 112 bits (270), Expect = 6e-26
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 8/192 (4%)
Frame = +3
Query: 216 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 395
+TF D NL L R I+ FEKP+++Q I ++G+D++AQA++G+GKTA + I IL
Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPIL 73
Query: 396 Q------QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 557
+ QID + R AL+L PTRELAQQ+ V+ L + TN + ++
Sbjct: 74 ELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQ 133
Query: 558 Q--LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 731
+ L +V+ TP R + L + +K V+DEAD MLS G+ + + + + L
Sbjct: 134 RPLLLDLPDIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLP 193
Query: 732 ADVQVILLSATM 767
Q L+SAT+
Sbjct: 194 RGTQSFLMSATL 205
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 111 bits (267), Expect = 1e-25
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Frame = +3
Query: 213 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 392
V TF++ +L+ + GFE P+ IQQ+A + GRD++ + +G+GKT ++ +
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180
Query: 393 LQQIDTSIRECQA-----LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 557
+ I+ L+LAPTRELA QIQ+ G + GG IR
Sbjct: 181 IVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIR 240
Query: 558 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 737
L GV + + TPGR+ DM+ + + VLDEAD ML GF+ QI + + D
Sbjct: 241 DLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 300
Query: 738 VQVILLSAT 764
Q ++ SAT
Sbjct: 301 RQTVMFSAT 309
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 107 bits (257), Expect = 2e-24
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Frame = +3
Query: 198 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 377
D + V ++ L + + I + G+EKP++IQ +AI GRDVI A++G+GKT
Sbjct: 412 DCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIA 471
Query: 378 FSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 542
F + + + I ++ + A+I+ PTRELA QI + LN + GG +
Sbjct: 472 FLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPI 531
Query: 543 REDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHD 713
++ I L+ G +VV TPGR+ D+++ R + + VLDEAD M GF+ Q+
Sbjct: 532 KDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMR 591
Query: 714 VFKMLSADVQVILLSAT 764
+ + D Q +L SAT
Sbjct: 592 IINNIRPDRQTVLFSAT 608
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 102 bits (244), Expect = 8e-23
Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Frame = +3
Query: 213 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 392
V + +L E+L + GF KP IQ I G D+I +A +G+GKT F I I
Sbjct: 121 VSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPI 180
Query: 393 LQQI--DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 566
L+ + + QAL++APTRELA QI + + N + + GG V++ R L
Sbjct: 181 LEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLN 240
Query: 567 SGVHVVVGTPGRVYDMITRRALHAN--TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 740
HVVV TPGR++ +I L N IK VLDEAD +L + +++ + ++L +
Sbjct: 241 KHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPM 300
Query: 741 ----QVILLSAT 764
Q + SAT
Sbjct: 301 HTQRQTFIFSAT 312
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 98.3 bits (234), Expect = 1e-21
Identities = 73/206 (35%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Frame = +3
Query: 213 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 392
V F L LL+ I G+ +P+ +Q+ +I GRD++A AQ+G+GKTA F I
Sbjct: 168 VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPI 227
Query: 393 L--------------QQIDTSIRECQA----LILAPTRELAQQIQKVVIALGDHLNAKCH 518
L Q R +A LILAPTREL QI + +
Sbjct: 228 LSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPC 287
Query: 519 ACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 698
A GG ++R IRQ++ G ++ TPGR+ D+I R + IK VLDEAD ML GF+
Sbjct: 288 AVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFE 347
Query: 699 DQIHDVFK---MLSADV-QVILLSAT 764
QI + + M S + Q ++ SAT
Sbjct: 348 PQIRHIVEGADMTSVEERQTLMFSAT 373
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 93.5 bits (222), Expect = 4e-20
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Frame = +3
Query: 222 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 401
FD++++ +L G+ Y ++P+ IQ + GRDV+ A++G+GKT F I LQ
Sbjct: 169 FDELDVSAKLREGLKNY--KEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQY 226
Query: 402 ID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 572
++ + + L+++PTRELA Q + + +L N K GG E R ++
Sbjct: 227 LNGLSDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAAKNA 286
Query: 573 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 716
V++GTPGR+ D+I ++ + + VLDEAD ML GF+ I ++
Sbjct: 287 -SVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNI 333
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 92.7 bits (220), Expect = 7e-20
Identities = 55/191 (28%), Positives = 104/191 (54%), Gaps = 5/191 (2%)
Frame = +3
Query: 207 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 386
+ V+ F ++ L + + F + IQ++ I ++GRD++ A++G+GKT F +
Sbjct: 36 ETVDHFAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIV 95
Query: 387 SILQQID----TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 554
+++ + TS+ AL+++PTRELA Q + ++ +G + IGG N +E+
Sbjct: 96 PLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEK 155
Query: 555 RQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 731
+L S ++++V TPGR+ I + + +++ +LDEAD +L GF+ + + L
Sbjct: 156 ERL-SRMNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLP 214
Query: 732 ADVQVILLSAT 764
Q +L SAT
Sbjct: 215 VHRQTMLFSAT 225
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 87.8 bits (208), Expect = 2e-18
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Frame = +3
Query: 219 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 398
+F +N+ + L + A GF+K + +Q AI ++ +D++ +A +G+GKT + +
Sbjct: 2 SFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFD 61
Query: 399 QI---DTSIRECQALILAPTRELAQQIQKVVIAL----------GDHLNAKCHACIGGTN 539
++ DT ALI+APTRELA QI V L G L A + GT
Sbjct: 62 KVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTL 121
Query: 540 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF 719
+ E VV+GTPGR+ +M++ + + +++ +LDEAD ++ GF+ + +
Sbjct: 122 TNDLASFREKNPSVVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSII 179
Query: 720 KMLSADVQVILLSATM 767
L + L SATM
Sbjct: 180 SQLPKQRRTGLFSATM 195
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 83.0 bits (196), Expect = 5e-17
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Frame = +3
Query: 285 PSAIQQRAIMPCIQ--GRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALI 437
P+AIQ + + +D +AQ+G+GKT + + I+Q++ T A+I
Sbjct: 162 PTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVI 221
Query: 438 LAPTRELAQQIQKVVIALGD----HLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 605
+APTREL QQI V L + H C+ IGG + + ++ GV++++GTPGR+
Sbjct: 222 MAPTRELCQQIYNVANKLNNNPLSHWIVSCNV-IGGEKKKSEKARIRKGVNILIGTPGRL 280
Query: 606 YDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 749
D + AL + ++ VLDE D ++ GF++ + + L + +I
Sbjct: 281 ADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSII 329
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 76.2 bits (179), Expect = 6e-15
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Frame = +3
Query: 273 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQI-----DTSIRECQAL 434
GFEK + +QQR + + + QA++GTGKT F + + + + + ++
Sbjct: 57 GFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSV 116
Query: 435 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN-VREDIRQLESGVHVVVGTPGRVYD 611
IL+PTRELA QI + L + IGG + +RE+ ++++ TPGR+ D
Sbjct: 117 ILSPTRELALQIFEEARKLTYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATPGRLED 176
Query: 612 MITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFK-MLSADVQVILLSATM 767
+ R L + + F+LDEAD ++ GF + I ++ + + + + + SATM
Sbjct: 177 HLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFSATM 230
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 70.5 bits (165), Expect = 3e-13
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Frame = +3
Query: 243 EELLRGIYAYGFEKPSAIQ----QRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQQID 407
EE GI +K + + QR +P I RD++A A +G+GKT + ILQ++
Sbjct: 50 EEFPEGILCENLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKLQ 109
Query: 408 TSI-RECQALILAPTRELAQQIQKVVIALGDHLNAK-CHACIGGTNVREDIRQLESGVHV 581
+ +A+I+APTREL +QI + L + K ++E +L +
Sbjct: 110 LHVPGGYRAIIVAPTRELCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDM 169
Query: 582 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI-HDVFKMLSADVQVILLS 758
+GTP R+ I + L ++ FV+DEAD + GF +Q H + S+++ L S
Sbjct: 170 CIGTPMRLVQAI-QTGLSFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFS 228
Query: 759 ATM 767
AT+
Sbjct: 229 ATI 231
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 68.1 bits (159), Expect = 2e-12
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +3
Query: 240 KEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQQID-TS 413
K+ + RG P +Q P G DV A +G+GKT ++ I I+Q + +
Sbjct: 143 KQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRT 202
Query: 414 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-----ESGVH 578
+ + +++ PTREL Q+ K + A G ++R + QL E +
Sbjct: 203 VPRLRCVVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRID 262
Query: 579 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 731
V+V TPGR+ D I + ++ V+DEAD +L + F+D + V +S
Sbjct: 263 VLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEIS 314
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 44.0 bits (99), Expect = 3e-05
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Frame = +3
Query: 237 LKEELLRGIY-AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 413
L +EL+ +Y + EK Q AI G VI + +GK+ + I ILQ +
Sbjct: 295 LSQELINALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL-LE 353
Query: 414 IRECQALILAPTRELAQQIQKVVIALGDHL----NAKCHACIGGTNVREDIRQLESGVHV 581
+ A + PT+ LAQ +K +I + ++ N + G T + E + ++
Sbjct: 354 DNQSTAFFVFPTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGDTPL-ESRESIIRSANI 412
Query: 582 VVGTPGRVYDMITRRA----LHANTIKLFVLDEA 671
+ P ++ I A +KLFVLDEA
Sbjct: 413 IFTNPDMLHQTILPNANRWYYFFKNLKLFVLDEA 446
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 34.3 bits (75), Expect = 0.024
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Frame = +3
Query: 300 QRAIMPCIQGRD--VIAQAQSGTGKTATFSISILQQIDTSIRE--------CQALILAPT 449
Q + P G D ++ A +G GKT + IL ++ +RE + + +AP
Sbjct: 524 QSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILNELQKHLREDLSFNLQNFKIVYIAPL 583
Query: 450 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRA 629
+ L Q++ N + G + + +Q S ++V TP + +D+ITR+A
Sbjct: 584 KALVQEMVNNFSKRLTPYNIRVAELTGDSQL---TKQQISETQIIVTTPEK-WDIITRKA 639
Query: 630 ---LHANTIKLFVLDE 668
+ N ++L ++DE
Sbjct: 640 NDLSYVNLVRLVIIDE 655
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 513 CHACIGGTNVREDIRQLE-SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 680
C I G N R + +L S + ++ + + R + A+T K+ +LDEAD M
Sbjct: 76 CARKIYGPNYRNQLMELNASDDRGIDAVREQIKNFASTRQIFASTFKMIILDEADAM 132
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 189 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 335
LDT+W V + NL+ + + I + F PS I + MP + R+
Sbjct: 184 LDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLNDRN 232
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.7 bits (61), Expect = 1.2
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = +3
Query: 402 IDTSIRECQALILAPTR-ELAQQIQKVVIALGDHLNAK-CHACIGGTNVREDIRQLESGV 575
+D IR+ A+ +P +LA + + D H +++ D+R +ESGV
Sbjct: 345 LDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGV 404
Query: 576 HVVVGTPGRVYDMITR--RALHANTIKLFVLDEADEMLSRGFKDQ 704
+ + T G YD + L+ + IK V E M G+ D+
Sbjct: 405 NRFIATSG--YDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDR 447
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 186 TLDTDWDQVVETFDDMNLKEELLRGIYAYGF 278
T D WD E FDD N + +GI+ F
Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +3
Query: 357 GTGKTATFSISILQQI----DTSIRECQALILAP-TRELAQQIQ 473
G G T F+ SILQQI + SI +C + +P R + ++IQ
Sbjct: 89 GKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQ 132
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 389 DSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 490
D+ TNR + SSFD S P+N++G ++
Sbjct: 487 DAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNT 520
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 468 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT-PGRVYDMITRRALHANT 644
++ + A+ DHL+ + CIG N+ ED VH + T G+ ++T H++
Sbjct: 134 VEMIRRAISDHLDLLNNCCIGIANLNED------SVHKISLTRSGKPSQLVTVSCRHSSV 187
Query: 645 IK 650
I+
Sbjct: 188 IQ 189
>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 DLREWTLGHLTPT 201
DLREWTLG L P+
Sbjct: 110 DLREWTLGFLQPS 122
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 503 QVITKSYHHLLNLLGQLSCGSQDQ 432
+++ KSYH+L N QLS ++DQ
Sbjct: 165 ELVDKSYHNLHNAWSQLSREAKDQ 188
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 802 MRDPVRILVQKEELTLERY 858
M++P+R+ + EE T++RY
Sbjct: 136 MKEPIRLFGESEEATIQRY 154
>SPAC4H3.13 |||transcription factor Pcc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 88
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/53 (20%), Positives = 27/53 (50%)
Frame = +3
Query: 435 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 593
+LAP REL +++ + + + D+ ++C R + L +++++ T
Sbjct: 29 VLAPDRELKEELVQRNLFVDDNYLVVNYSCSSARMTRVTVNSLFENLYLIIDT 81
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -3
Query: 563 QLANIFTDIGAT---NASMAFSIQVITKSYHHLLNLL 462
+L NIFT + N+ FS+ +++++Y H NLL
Sbjct: 598 KLQNIFTTLYTAWCHNSIAVFSLCLLSQNYEHAANLL 634
>SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 101
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 183 QGPFPEVHRNYLDPSMAHFWNPLANL 106
Q P P VH ++ PS A NPL ++
Sbjct: 75 QNPPPSVHSSHKQPSKARSPNPLLSM 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,876,209
Number of Sequences: 5004
Number of extensions: 87129
Number of successful extensions: 300
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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