Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F01
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 32 0.49
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 32 0.49
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 31 1.5
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 2.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 2.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 2.0
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.0
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 30 2.0
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 29 3.5
AC024799-2|AAK72317.3| 328|Caenorhabditis elegans Serpentine re... 29 3.5
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 4.6
Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 29 6.1
AF022970-5|AAB69897.1| 129|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 8.1
AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine re... 28 8.1
>Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical
protein C47E8.6 protein.
Length = 357
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 363 KDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRLRLPRY 521
+DS+ + R+K+ + + Q ++N+DE KE++ L+ Y ++R Y
Sbjct: 298 RDSISADLIDSREKLKDQAVLLGQNQANIDEMSKEIARLQDYKRNFQVRKGMY 350
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 327 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRL 506
D+C + L++ S L K R+KI++L L + N+ + KE+ LK + L
Sbjct: 315 DKCLNVRVAALEQFSNLRPNKHVREKIEMLDLCLKDHEVNIRDAAKEV--LKNWVRNLST 372
Query: 507 RLPRYQK 527
R QK
Sbjct: 373 RWSESQK 379
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 327 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRL 506
D+C + L++ S L K R+KI++L L + N+ + KE+ LK + L
Sbjct: 315 DKCLNVRVAALEQFSNLRPNKHVREKIEMLDLCLKDHEVNIRDAAKEV--LKNWVRNLST 372
Query: 507 RLPRYQK 527
R QK
Sbjct: 373 RWSESQK 379
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 132 FRVSSTESDGQYT--KCHLCYTVKRNFYCTDCIKEGNFVHS 248
F+VSS S + +C C T +RN CT+CI+ + HS
Sbjct: 847 FKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHS 887
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 264 DRYSEKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRS 443
D++ K +LL + + D ++ A KL K L + K C++++D + L I+++
Sbjct: 516 DKWMVKQKELL---IKARTSTDETDKKNATKLVKH-LHKKIKACKEEVDGILLKISEKSM 571
Query: 444 NVDEKKKELSELK 482
VDE ++ ELK
Sbjct: 572 VVDEIAAQIEELK 584
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +3
Query: 216 DCIKEGNFVHSSMPYSDRYSEKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQC 395
D +KE + +S+ ++ E+L R K + L++ KL K L E +
Sbjct: 1370 DALKE---LKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTK--LRNELQDT 1424
Query: 396 RDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRLRLPRYQKRVASLGYPFRETE 566
DK L + +R + +E +K ELK N +++ + YQ + L + R +E
Sbjct: 1425 NDK---LITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSE 1478
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +3
Query: 216 DCIKEGNFVHSSMPYSDRYSEKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQC 395
D +KE + +S+ ++ E+L R K + L++ KL K L E +
Sbjct: 1443 DALKE---LKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTK--LRNELQDT 1497
Query: 396 RDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRLRLPRYQKRVASLGYPFRETE 566
DK L + +R + +E +K ELK N +++ + YQ + L + R +E
Sbjct: 1498 NDK---LITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSE 1551
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +3
Query: 216 DCIKEGNFVHSSMPYSDRYSEKLSKLLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQC 395
D +KE + +S+ ++ E+L R K + L++ KL K L E +
Sbjct: 1443 DALKE---LKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTK--LRNELQDT 1497
Query: 396 RDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRLRLPRYQKRVASLGYPFRETE 566
DK L + +R + +E +K ELK N +++ + YQ + L + R +E
Sbjct: 1498 NDK---LITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSE 1551
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 327 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRL 506
D ++L KLK L E + + ++ + + +SN D +KEL ELKT + +
Sbjct: 279 DAAKQLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADVAEKELDELKTQMRQTKK 338
Query: 507 RL 512
L
Sbjct: 339 EL 340
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 327 DRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRL 506
D ++L KLK L E + + ++ + + +SN D +KEL ELKT + +
Sbjct: 259 DAAKQLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADVAEKELDELKTQMRQTKK 318
Query: 507 RL 512
L
Sbjct: 319 EL 320
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 300 LKMNRKHILDRCERL--LAPKLKKDSLLTEAK--QCRDKIDLLKLAINQRRSNVDEKKKE 467
+K R +L+ L + KLK+ S E+K + K DLL+ + + R+N +K E
Sbjct: 15 IKRQRDIVLEESALLKEVNEKLKQKSATEESKIELLQKKADLLEQVLEEERANHQREKDE 74
Query: 468 LSELKTYNTELRLR 509
E K N E +++
Sbjct: 75 AVEQKKNNLESQIQ 88
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 180 LCYTVKRNFYCTDCIKEGNFVHSSMPYSDRYSEKLSKLLRLKM 308
+CYTV NF C ++V + S+RYS ++S L R M
Sbjct: 142 VCYTVAMNFLCAADDYADDYVRGLV--SERYSMEISNLPRFPM 182
>AC024799-2|AAK72317.3| 328|Caenorhabditis elegans Serpentine
receptor, class j protein53 protein.
Length = 328
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 746 HWFLEVXSYKLHVFYAVTWYHNSYTPG 666
HW++ + ++ L V Y VTW+ Y PG
Sbjct: 128 HWYMTISAFVL-VLYFVTWHAICYFPG 153
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 270 YSEKLSKLLRLKMNRKHILDRCERL-LAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSN 446
+ E L + L + + H DR + L L K ++ L++ C++ + L+ ++ +
Sbjct: 297 HEEALKEELLARQDEFH--DRLQELQLQSKRSREDLVS----CKNDVTALEKKLHNKEKE 350
Query: 447 VDEKKKELSELKTYNTELRLRLPRYQKRVASLGYPFRETE 566
V KEL ++KT + RL A F++ E
Sbjct: 351 VQTLTKELDQVKTETNDKIRRLTEVTSEFAEYRKKFQQQE 390
>Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical
protein R53.7b protein.
Length = 488
Score = 28.7 bits (61), Expect = 6.1
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 192 VKRNFYC-TDCIKEGNFVHSSMPYSD----RYSEKLS--KLLRLKMNRKHILDRCERLLA 350
VKRN TDC+ N + + P +D R S+ LS +L+ + ++ K ILD CE L
Sbjct: 221 VKRNILTLTDCL---NAIRNETPPADGQVLRASDILSGNQLVSVSISSK-ILDLCEELHQ 276
Query: 351 PKLKKDSLLTEAKQCRDKIDLLKLAINQRRSN 446
+L + +L +AK+ + I + ++ + N
Sbjct: 277 NRLHRVVVLDDAKEVVNIISVRRVIAAIHKQN 308
>Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical
protein R53.7a protein.
Length = 460
Score = 28.7 bits (61), Expect = 6.1
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 192 VKRNFYC-TDCIKEGNFVHSSMPYSD----RYSEKLS--KLLRLKMNRKHILDRCERLLA 350
VKRN TDC+ N + + P +D R S+ LS +L+ + ++ K ILD CE L
Sbjct: 193 VKRNILTLTDCL---NAIRNETPPADGQVLRASDILSGNQLVSVSISSK-ILDLCEELHQ 248
Query: 351 PKLKKDSLLTEAKQCRDKIDLLKLAINQRRSN 446
+L + +L +AK+ + I + ++ + N
Sbjct: 249 NRLHRVVVLDDAKEVVNIISVRRVIAAIHKQN 280
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +3
Query: 291 LLRLKMNRKHILDRCERLLAPKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKEL 470
+L L + HI+ +L AP KD+L + KQ D+ D + +RR+N+ +K+ +
Sbjct: 448 ILDLGKSDGHIVTPLNKL-APLPSKDALFGDVKQKLDEYDETRKQF-ERRNNLQREKQAM 505
Query: 471 SELKTYNTELRLRLPRYQKRVASLGYP 551
+ + + ++R S+G P
Sbjct: 506 ALQEKLKLRQQKNRRNRKERRDSIGTP 532
>AF022970-5|AAB69897.1| 129|Caenorhabditis elegans Hypothetical
protein F13A2.4 protein.
Length = 129
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +3
Query: 351 PKLKKDSLLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTELRLRLPRYQK 527
P L K +LL EA+ DLL+ + K+K+L+E K + E RLP K
Sbjct: 31 PFLMKLNLLVEARGITSFEDLLQAKTEVEKELEVGKQKDLAEDKENDVESEERLPEEPK 89
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 342 LLAPKLKKDS--LLTEAKQCRDKIDLLKLAINQRRSNVDEKKKELSELKTYNTEL 500
+LA K+ K+S LL + + ++I ++K + ++ VDEKK +EL+ YN E+
Sbjct: 1346 VLAKKINKNSEELLVKVVRREEEI-VVKKSDDKFLVKVDEKKVNPTELEQYNIEI 1399
>AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine
receptor, class j protein55 protein.
Length = 332
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 746 HWFLEVXSYKLHVFYAVTWYHNSYTPG 666
HW+L + + V++A TWY Y PG
Sbjct: 128 HWYLTISAVVFVVYFA-TWYAICYFPG 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,877,246
Number of Sequences: 27780
Number of extensions: 382406
Number of successful extensions: 1168
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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