Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E24
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0592 - 34941530-34941550,34942444-34942806,34942940-349429...    29   3.8  
08_02_1400 + 26779193-26779245,26779622-26779766,26779950-267810...    29   6.7  

>03_06_0592 -
           34941530-34941550,34942444-34942806,34942940-34942991,
           34943277-34943488
          Length = 215

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 177 IIDRLQSKKC*ERLWKFLIKETKXLVAFFTKV 82
           +I RLQ+K      W FL++ETK ++ F  +V
Sbjct: 151 VIARLQAKGEERSRWTFLLRETKAMMTFIQEV 182


>08_02_1400 +
           26779193-26779245,26779622-26779766,26779950-26781059,
           26781153-26781404,26782150-26782230,26782623-26782770,
           26782858-26783264,26783557-26783613
          Length = 750

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -3

Query: 489 ASVFFECSSNSPINPGAYSLPSPSHTFRSS*RVF 388
           +S  +ECSS  P+NP A   P+PS    SS R F
Sbjct: 55  SSRLYECSSTLPVNP-AEEAPTPSSRPVSSPRSF 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,355,647
Number of Sequences: 37544
Number of extensions: 351261
Number of successful extensions: 747
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)