Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E24
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p...    29   3.4  
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF045644-1|AAC02601.1|  543|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
           protein F46F11.1b protein.
          Length = 1225

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +1

Query: 571 IVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVXACDE 693
           ++EK  D+H +LE+L     +     ++ HK+  ++  C+E
Sbjct: 425 VIEKQRDRHQILEKLREGTGE-----EEIHKSEHDLEVCEE 460


>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
           protein F46F11.1a protein.
          Length = 1339

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +1

Query: 571 IVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVXACDE 693
           ++EK  D+H +LE+L     +     ++ HK+  ++  C+E
Sbjct: 425 VIEKQRDRHQILEKLREGTGE-----EEIHKSEHDLEVCEE 460


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 580 KMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVXACDENEDYFSGSFKIKSEYVEDL 750
           ++N+K  V+E+++R+     E   K  +   E+  C E+EDY     K   E  E+L
Sbjct: 258 QLNEKDLVIEKITRKIELLQENNVKKDQRIYELEQCFESEDYCKILQKDTKELEEEL 314


>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
           protein C38D9.3 protein.
          Length = 1496

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 562 DTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKA 666
           DT+ +E  NDK   +ERL    A++ EKL KA +A
Sbjct: 202 DTANLE--NDKRDEVERLKAELARQAEKLMKAEQA 234


>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical protein
            W03A3.2 protein.
          Length = 1540

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 532  CQPKFRIEPKDTSIVEKMNDKHSVLERL 615
            C+PK R  P +  I+E+MN +H ++ ++
Sbjct: 1227 CKPKLRHLPTNKLILEQMNTQHPIVGKI 1254


>AF045644-1|AAC02601.1|  543|Caenorhabditis elegans Hypothetical
           protein F57H12.5 protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 553 EPKDTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVXACDENEDYF 708
           E KD    E+  D+    +   R D +  +K +K  + +E    C EN  YF
Sbjct: 126 EKKDEEKRERQEDRKEERKENKREDKKEEKKEEKKEEKKEVRKDCRENSVYF 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,957,392
Number of Sequences: 27780
Number of extensions: 354392
Number of successful extensions: 1058
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)