Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E22
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680...    30   2.3  
07_03_1136 + 24218601-24218734,24218769-24219906                       30   3.1  
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     29   5.4  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    29   5.4  
09_06_0125 - 21011757-21012428                                         29   7.1  
03_06_0317 + 33097257-33097336,33098500-33098926,33100007-331000...    29   7.1  
07_03_0177 - 14770777-14772045                                         28   9.4  

>12_01_0752 -
           6798938-6799312,6799628-6799768,6800257-6800325,
           6800407-6800454,6801740-6801836,6801922-6802001,
           6802099-6802170,6802335-6802429,6802853-6802934,
           6805476-6805853
          Length = 478

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 627 VLGXFXQKPPPPRAKFXKNPPP 692
           V+  F   PPPPRA F   PPP
Sbjct: 50  VIRVFAAAPPPPRAAFFAPPPP 71


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -3

Query: 544 GXXGXP-PLGGG*PXPPXXXTGGLGLMXRGNGEGXQKAKPXSPGXG 410
           G  G P PLGGG   PP    GG          G   A+P +PG G
Sbjct: 93  GGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGG 138



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -3

Query: 928 GGXXXPARGGGGAXXPXGGTXKGGXLXKXPPFPXG 824
           GG   P  GGGG   P      GG     PP P G
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGG 137


>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -3

Query: 937 GG*GGXXXPARGGGGAXXPXGGTXKGG 857
           GG GG   P  GGG    P GG   GG
Sbjct: 41  GGRGGRGPPGGGGGRGYEPGGGRGYGG 67


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 937 GG*GGXXXPARGGGGAXXPXGGTXKGG 857
           GG GG     RGGGG     GG  +GG
Sbjct: 96  GGYGGGGGGGRGGGGGGGGRGGGGRGG 122


>09_06_0125 - 21011757-21012428
          Length = 223

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 651 PPPPRAKFXKNPPPXSKG 704
           PPPPRA F   PPP   G
Sbjct: 173 PPPPRAPFLAPPPPPPVG 190


>03_06_0317 +
           33097257-33097336,33098500-33098926,33100007-33100078,
           33100490-33100600,33100973-33101173,33102157-33102222
          Length = 318

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 618 KARVLGXFXQKPPPPRAKFXKNPPPXSK 701
           +A+ +  F Q+ PPP+A+  K PP  +K
Sbjct: 210 RAKPMPSFYQEGPPPKAELKKVPPTRAK 237


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -3

Query: 937 GG*GGXXXPARGGGGAXXPXGGTXKGGXLXKXPPFPXG 824
           GG GG      GGGG     GG+  GG   K   F  G
Sbjct: 362 GGGGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGGFGFG 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,821,574
Number of Sequences: 37544
Number of extensions: 262049
Number of successful extensions: 1311
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)