Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E22
         (945 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016139-1|AAV37024.1|  587|Drosophila melanogaster AT30209p pro...    31   1.7  
AE014134-2709|AAF53528.3|  263|Drosophila melanogaster CG31737-P...    30   4.0  
M84606-1|AAA28490.1|  697|Drosophila melanogaster transmembrane ...    29   9.3  
BT021407-1|AAX33555.1|  720|Drosophila melanogaster LD06749p pro...    29   9.3  
BT016046-1|AAV36931.1|  699|Drosophila melanogaster LP20007p pro...    29   9.3  
AY061259-1|AAL28807.1|  124|Drosophila melanogaster LD19086p pro...    29   9.3  
AF162774-1|AAF68853.2|  720|Drosophila melanogaster Nopp140-like...    29   9.3  
AE014298-1680|AAF48089.1|  699|Drosophila melanogaster CG9355-PA...    29   9.3  
AE014296-3628|AAF51788.3|  720|Drosophila melanogaster CG7421-PA...    29   9.3  

>BT016139-1|AAV37024.1|  587|Drosophila melanogaster AT30209p
           protein.
          Length = 587

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 475 PGPRXFXXGXXVIPPPKGVXRFXPKSXXXPGKKTFPPNGPQGAXKPXKR 621
           PGPR +       P P+G     P+    PG + +P  GP+G   P  R
Sbjct: 165 PGPRGYPG-----PGPRGYPGPGPRGYPGPGPRGYPGRGPRGYPGPGPR 208



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 475 PGPRXFXXGXXVIPPPKGVXRFXPKSXXXPGKKTFPPNGPQG 600
           PGPR +       P P+G     P+    PG + +P  GP+G
Sbjct: 181 PGPRGYPG-----PGPRGYPGRGPRGYPGPGPRGYPGPGPRG 217


>AE014134-2709|AAF53528.3|  263|Drosophila melanogaster CG31737-PA
           protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 511 IPPPKGVXRFXPKSXXXPGKKTFPPNGPQGAXKPXKR 621
           +P P+G     P+    PG + +P  GP+G   P  R
Sbjct: 164 VPGPRGYPGPGPRGYPGPGPRGYPGRGPRGYPGPGPR 200


>M84606-1|AAA28490.1|  697|Drosophila melanogaster transmembrane
           protein protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 651 PPPPRAKFXKNPPP 692
           PPPP A+F K PPP
Sbjct: 168 PPPPGAQFYKGPPP 181


>BT021407-1|AAX33555.1|  720|Drosophila melanogaster LD06749p
           protein.
          Length = 720

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 937 GG*GGXXXPARGGGGAXXPXGGTXKGG 857
           GG GG     RGGGG     GG  +GG
Sbjct: 656 GGFGGRGGGGRGGGGGFGGRGGGGRGG 682


>BT016046-1|AAV36931.1|  699|Drosophila melanogaster LP20007p
           protein.
          Length = 699

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 651 PPPPRAKFXKNPPP 692
           PPPP A+F K PPP
Sbjct: 170 PPPPGAQFYKGPPP 183


>AY061259-1|AAL28807.1|  124|Drosophila melanogaster LD19086p
           protein.
          Length = 124

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 561 PR-EKNFSXKRAPRGPXTXKKARVLGXFXQKPPPPRAKFXKNPP 689
           PR +KN   +   + P   KKA V     + PPP   KF +NPP
Sbjct: 20  PRFQKNLPVRHQRKSPPALKKAAVP---RRTPPPWPLKFRRNPP 60


>AF162774-1|AAF68853.2|  720|Drosophila melanogaster Nopp140-like
           nucleolar protein protein.
          Length = 720

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 937 GG*GGXXXPARGGGGAXXPXGGTXKGG 857
           GG GG     RGGGG     GG  +GG
Sbjct: 656 GGFGGRGGGGRGGGGGFGGRGGGGRGG 682


>AE014298-1680|AAF48089.1|  699|Drosophila melanogaster CG9355-PA
           protein.
          Length = 699

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 651 PPPPRAKFXKNPPP 692
           PPPP A+F K PPP
Sbjct: 170 PPPPGAQFYKGPPP 183


>AE014296-3628|AAF51788.3|  720|Drosophila melanogaster CG7421-PA,
           isoform A protein.
          Length = 720

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 937 GG*GGXXXPARGGGGAXXPXGGTXKGG 857
           GG GG     RGGGG     GG  +GG
Sbjct: 656 GGFGGRGGGGRGGGGGFGGRGGGGRGG 682


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,062,146
Number of Sequences: 53049
Number of extensions: 407096
Number of successful extensions: 1908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)