Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E19
         (906 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA...    30   3.8  
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    30   5.0  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    30   5.0  

>AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA
           protein.
          Length = 2517

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -2

Query: 263 ATXSTMCPFMAVTRLGXY*LGTTSXELVSSISSKHSLLCLDSPHVYSSPLSEIRN---IX 93
           A  ST  PF   +R   + +     +LV  + ++ SLLC+  P+ ++  L+++ N   + 
Sbjct: 173 ANESTWTPFQPSSRYRSHIMHQGLSQLVVQMLAELSLLCIKQPNGWTESLTQLANRLFVI 232

Query: 92  RETLEAFGCLI-GIRP 48
           R+ L    CL+ G  P
Sbjct: 233 RDYLGGPLCLLKGFAP 248


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire
           protein.
          Length = 5233

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +1

Query: 106 ISDNGLLYTCGESRHNKLCLDDIDDTNSXXVVPNQYXPKRVTAMNGHIVDXVAC 267
           ++D+G ++  G +R       +  D++     P    PK++T ++GH+V   AC
Sbjct: 666 VNDDGTVFFAGTARRG-----EDGDSSKNRRQPKAVKPKKMTKIDGHVVVHAAC 714


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
           protein.
          Length = 5233

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +1

Query: 106 ISDNGLLYTCGESRHNKLCLDDIDDTNSXXVVPNQYXPKRVTAMNGHIVDXVAC 267
           ++D+G ++  G +R       +  D++     P    PK++T ++GH+V   AC
Sbjct: 666 VNDDGTVFFAGTARRG-----EDGDSSKNRRQPKAVKPKKMTKIDGHVVVHAAC 714


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,421,791
Number of Sequences: 53049
Number of extensions: 402453
Number of successful extensions: 648
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)