Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E19
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   2.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   2.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   2.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.2  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 206  LGTTSXELVSSISSKHSLLCLDSPHVYSSPLSEIRNIXRETL 81
            L  TS  +  S+S+  ++ CL SP +Y   +   RN+ +  +
Sbjct: 877  LRITSMSVTISLSASVTIACLFSPKLYIILIRPERNVRQSMM 918


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 176 SISSKHSLLCLDSPHVYSSPLSEIRNIXRE 87
           S+S+  +L+CL SP +Y       +NI R+
Sbjct: 745 SLSATVTLVCLYSPKIYIILFQPDKNIRRK 774


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 199  VPNQYXPKRVTAMNGHIV 252
            VP    P R+T+  GH+V
Sbjct: 1307 VPTNRVPARITSFGGHVV 1324


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 199  VPNQYXPKRVTAMNGHIV 252
            VP    P R+T+  GH+V
Sbjct: 1303 VPTNRVPARITSFGGHVV 1320


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 176 SISSKHSLLCLDSPHVYSSPLSEIRNIXRE 87
           S+S+  +L+CL SP +Y       +NI R+
Sbjct: 835 SLSATVTLVCLYSPKIYIILFQPDKNIRRK 864


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 231  RHEWAHRRXCGVWGLPHSTXXHQXLERGLDEQR 329
            R E +  R    +G+PHST  ++  ER L   R
Sbjct: 1057 RGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPR 1089


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,005
Number of Sequences: 438
Number of extensions: 2782
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)