Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E18
         (912 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-P...    31   2.2  
BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p pro...    29   6.7  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.8  
BT022990-1|AAY55406.1|  155|Drosophila melanogaster IP08464p pro...    29   8.8  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.8  

>AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-PA
           protein.
          Length = 360

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 632 PPPWTSITKSTLKSXVAKPDRTYKDTRRFPLKXPRAXXCSDPAXYRIPVRLSPSGSVAPS 811
           PP   + T   +++ ++ P   Y      P   P A    +P+   I V   P   +APS
Sbjct: 286 PPTAAAYTGEEVQTTLSAPANQYLP----PATAPAALAIEEPSMAPIVVEEQPEQRLAPS 341

Query: 812 HXPXCRYPXP 841
           H P   Y  P
Sbjct: 342 HVPATSYGPP 351


>BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p
           protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +2

Query: 632 PPPWTSITKSTLKSXVAKPDRTYKDTRRFPLKXPRAXXCSDPAXYRIPVRLSPSGSVAPS 811
           PP   + T   +++ ++ P   Y      P   P A    +P+   I V   P   +APS
Sbjct: 318 PPTAAAYTGEEVQTTLSAPANQYLP----PATAPAALAIEEPSMAPIVVEEQPEQRLAPS 373

Query: 812 HXPXCRY 832
           H P   Y
Sbjct: 374 HVPATSY 380


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 395 ESANARGXAVCVLGALPLPRSLTRCARSFGCG 490
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>BT022990-1|AAY55406.1|  155|Drosophila melanogaster IP08464p
           protein.
          Length = 155

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +2

Query: 650 ITKSTLKSXVAKPDRTYK--DTRRFPLKXPRAXXCSDPAXYRIPVRLSPSGSVAPSHXPX 823
           +TK T+   V  PD T +  D    P     A    +P  Y+ P  L+P  + AP+  P 
Sbjct: 1   MTKRTVDYSVVDPDGTKRTVDYTADPHHGFNAVVRKEPLAYKAPAHLAPVVAPAPAPVPA 60

Query: 824 CRYPXP 841
              P P
Sbjct: 61  HYGPAP 66


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 395 ESANARGXAVCVLGALPLPRSLTRCARSFGCG 490
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,665,337
Number of Sequences: 53049
Number of extensions: 559520
Number of successful extensions: 1196
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)