Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_E12
(903 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030157-1|AAH30157.2| 517|Homo sapiens GTF3C5 protein protein. 72 3e-12
BC017337-1|AAH17337.1| 519|Homo sapiens general transcription f... 72 3e-12
BC011355-1|AAH11355.1| 519|Homo sapiens GTF3C5 protein protein. 72 3e-12
AY007123-1|AAG01991.1| 519|Homo sapiens protein ( Homo sapiens ... 72 3e-12
AL162417-4|CAI13408.1| 457|Homo sapiens general transcription f... 72 3e-12
AL162417-3|CAI13407.1| 526|Homo sapiens general transcription f... 72 3e-12
AL162417-2|CAI13406.1| 519|Homo sapiens general transcription f... 72 3e-12
AF133124-1|AAD41476.1| 519|Homo sapiens transcription factor II... 72 3e-12
AK097295-1|BAC04993.1| 509|Homo sapiens protein ( Homo sapiens ... 58 4e-08
AL162417-1|CAI13405.1| 244|Homo sapiens general transcription f... 57 8e-08
BC009741-1|AAH09741.2| 449|Homo sapiens GTF3C5 protein protein. 49 3e-05
AL162417-5|CAI13409.1| 224|Homo sapiens general transcription f... 31 5.7
>BC030157-1|AAH30157.2| 517|Homo sapiens GTF3C5 protein protein.
Length = 517
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 22 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 80
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 81 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 139
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 140 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 182
>BC017337-1|AAH17337.1| 519|Homo sapiens general transcription
factor IIIC, polypeptide 5, 63kDa protein.
Length = 519
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>BC011355-1|AAH11355.1| 519|Homo sapiens GTF3C5 protein protein.
Length = 519
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AY007123-1|AAG01991.1| 519|Homo sapiens protein ( Homo sapiens
clone CDABP0017 mRNA sequence. ).
Length = 519
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-4|CAI13408.1| 457|Homo sapiens general transcription
factor IIIC, polypeptide 5,ansporting, mitochondrial F1
c protein.
Length = 457
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-3|CAI13407.1| 526|Homo sapiens general transcription
factor IIIC, polypeptide 5,eroid dehydrogenase-like
(HSPC protein.
Length = 526
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-2|CAI13406.1| 519|Homo sapiens general transcription
factor IIIC, polypeptide 5, protein.
Length = 519
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AF133124-1|AAD41476.1| 519|Homo sapiens transcription factor
IIIC63 protein.
Length = 519
Score = 72.1 bits (169), Expect = 3e-12
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTS 82
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 83 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 141
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 142 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AK097295-1|BAC04993.1| 509|Homo sapiens protein ( Homo sapiens
cDNA FLJ39976 fis, clone SPLEN2028994, highly similar to
Homo sapiens transcription factor IIIC63 mRNA. ).
Length = 509
Score = 58.0 bits (134), Expect = 4e-08
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Frame = +1
Query: 157 IAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAKKIYGDCVNTA 336
+ V +PG+V++ K + LGG +S+ Y + P++ + + +T+
Sbjct: 24 MVCVEYPGVVRDVAKMLPTLGGEEGVSRIYAD-----------PKDPYCHPVCANRFSTS 72
Query: 337 GVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSA 501
+LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E G
Sbjct: 73 SLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK- 131
Query: 502 PPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
+ ++++ + F + P +I P FSR D P++ Y
Sbjct: 132 -HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 174
>AL162417-1|CAI13405.1| 244|Homo sapiens general transcription
factor IIIC, polypeptide 5,d protein-like family
protein.
Length = 244
Score = 57.2 bits (132), Expect = 8e-08
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +1
Query: 262 KRLGLSYQPQNKLAKKIYGDCVNTAGVLLKVKVK----KTINGSEVKREV-ISTTPLGQV 426
KRL L ++P++ + + +T+ +LL+++ + K + G+E EV LG +
Sbjct: 11 KRLELYFRPKDPYCHPVCANRFSTSSLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGII 70
Query: 427 RKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSR 606
IYKF+ + DFQYL V E G + ++++ + F + P +I P FSR
Sbjct: 71 STIYKFQGMSDFQYLAVHTEAGGK--HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSR 128
Query: 607 FDKPLNLDY 633
D P++ Y
Sbjct: 129 LDAPVDYFY 137
>BC009741-1|AAH09741.2| 449|Homo sapiens GTF3C5 protein protein.
Length = 449
Score = 48.8 bits (111), Expect = 3e-05
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +1
Query: 328 NTAGVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGA 492
+T+ +LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E
Sbjct: 10 STSSLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAG 69
Query: 493 GSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 633
G + ++++ + F + P +I P FSR D P++ Y
Sbjct: 70 GK--HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 114
>AL162417-5|CAI13409.1| 224|Homo sapiens general transcription
factor IIIC, polypeptide 5,r RAS oncogene family)
protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 451 LCDFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLD 630
+ DFQYL V E G + ++++ + F + P +I P FSR D P++
Sbjct: 1 MSDFQYLAVHTEAGGKHTS--MYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYF 58
Query: 631 Y 633
Y
Sbjct: 59 Y 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,840,626
Number of Sequences: 237096
Number of extensions: 2417992
Number of successful extensions: 4955
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4929
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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