Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_E12
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35603-3|CAA84675.1| 433|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 29 4.5
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 29 4.5
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 29 6.0
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 28 7.9
>Z35603-3|CAA84675.1| 433|Caenorhabditis elegans Hypothetical
protein T02C12.3 protein.
Length = 433
Score = 77.0 bits (181), Expect = 2e-14
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Frame = +1
Query: 127 TMEQNNFSHSIAAVLFPGLVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLAK 306
T ++ + + +PG+VKN DKA++ +GG++ +SQ++ N L LS+ P N
Sbjct: 8 TQQKREEPQQLVLIKYPGIVKNVDKALQTMGGLQLISQSH--FNNHSLELSHTPDNPYTS 65
Query: 307 KIYG-----DCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFESLCDFQYL 471
+I D V++ + L +KV++ ++ I T+ LG V +Y F+ +CDFQYL
Sbjct: 66 RIMAERKPQDNVSSGTLHLVMKVRR----KKIDPTKIKTSFLGLVNTVYTFDVMCDFQYL 121
Query: 472 PVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPG-----PQFIIPSSFSRFDKP------ 618
P+ K G + ++ +++P+ + + + P F+ P FSR+ P
Sbjct: 122 PLKKR-VGCDTFEDLIPKLIPTDIASALSWWDASESVATPLFLPPYQFSRYLTPSTKILG 180
Query: 619 LNLDYIEKKSILEKNTSLGQDDDIHRK 699
D+ EK +K GQ+ + RK
Sbjct: 181 RETDHTEKTKNAQKK-GYGQNLRVERK 206
>U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical
protein F45F2.10 protein.
Length = 980
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 541 VDTLQFLTEPGPQFIIPSSFSRFD--KPLNLDYIEKKSILEKNTSLGQDDDIHRKRRLER 714
++ +F EP F+IP ++RFD P N +I + ++ + + K+R+
Sbjct: 690 IERSEFEEEPVVLFLIPCQYNRFDTTMPANFPHIVRVPMVTDALATAERIAAKEKKRIAS 749
Query: 715 GG 720
GG
Sbjct: 750 GG 751
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 283 QPQNKLAKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 456
Q Q +L+ + V + ++++ + I+ E + P +++ + L
Sbjct: 1028 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 1087
Query: 457 DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 636
D ++LP+ +G S PP ++ P Q PQF +P++ S + L+ D +
Sbjct: 1088 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 1141
Query: 637 EKKSILEKNT 666
++ L K T
Sbjct: 1142 DEFYSLRKPT 1151
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 283 QPQNKLAKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 456
Q Q +L+ + V + ++++ + I+ E + P +++ + L
Sbjct: 375 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 434
Query: 457 DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 636
D ++LP+ +G S PP ++ P Q PQF +P++ S + L+ D +
Sbjct: 435 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 488
Query: 637 EKKSILEKNT 666
++ L K T
Sbjct: 489 DEFYSLRKPT 498
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 283 QPQNKLAKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 456
Q Q +L+ + V + ++++ + I+ E + P +++ + L
Sbjct: 1028 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 1087
Query: 457 DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 636
D ++LP+ +G S PP ++ P Q PQF +P++ S + L+ D +
Sbjct: 1088 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 1141
Query: 637 EKKSILEKNT 666
++ L K T
Sbjct: 1142 DEFYSLRKPT 1151
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 283 QPQNKLAKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 456
Q Q +L+ + V + ++++ + I+ E + P +++ + L
Sbjct: 375 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 434
Query: 457 DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 636
D ++LP+ +G S PP ++ P Q PQF +P++ S + L+ D +
Sbjct: 435 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 488
Query: 637 EKKSILEKNT 666
++ L K T
Sbjct: 489 DEFYSLRKPT 498
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical
protein F54D1.6 protein.
Length = 1423
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 505 PQCILEQIMPSGVDTLQFL-TEPGPQFIIPSSFSRFDKPLNLDYIEKKSI 651
PQ +L ++ S + +L FL T PQF +++S+ D+ +Y++KKS+
Sbjct: 596 PQQLLSGLVSSPI-SLHFLWTSNNPQFAT-TTYSQQDESARTEYVKKKSL 643
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 7.9
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +1
Query: 163 AVLFPGLVKNEDKAIE-CLGGIRQLSQAYTELNKKRLGL--SYQPQNKL----AKKIYGD 321
++L G K D +I C GG ++L A + +KRL L SYQP + K G
Sbjct: 287 SLLREGYAKCVDWSIGLCTGGAQKLRDAERQAKEKRLRLWKSYQPTSSAYSGDRKAFTGK 346
Query: 322 CVNTAGVLLKVKVKKTINGSEVKREVIS 405
V VL V + +GSEVK + S
Sbjct: 347 VVEI--VLSDAVVVQKDDGSEVKLHLSS 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,218,654
Number of Sequences: 27780
Number of extensions: 404190
Number of successful extensions: 872
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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