Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E03
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           31   0.97 
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997...    30   2.9  
07_01_0974 + 8211602-8212051                                           29   3.9  
09_02_0387 - 8375043-8375831,8376483-8376785,8414151-8414273           29   5.2  
01_05_0423 + 22032940-22033695                                         29   5.2  
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501...    29   6.8  
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    29   6.8  
05_03_0665 - 16774043-16774522                                         29   6.8  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.0  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 425 PPPPKKXXXFFXPPPPXKKXXAXGGGGXPP 514
           PPPP        PPPP     A G G  PP
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAAGAGSGPP 350



 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/53 (30%), Positives = 16/53 (30%)
 Frame = -1

Query: 619 PXPXPXVFFXXKKKXXKGXXXPPPPXGKKKXXXXXXGXXPPPXXXXFFGGGGG 461
           P P P            G   PPPP           G  PPP       GGGG
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGG 383


>03_02_0631 +
           9969841-9969868,9969965-9970082,9970186-9970828,
           9971146-9971935,9972002-9972051,9972618-9972704
          Length = 571

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 417 KKTPPPQKKXXXFFXPPPPPKK 482
           K +PPP +K      PPPPP+K
Sbjct: 88  KVSPPPAQKPSKVSPPPPPPQK 109


>07_01_0974 + 8211602-8212051
          Length = 149

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 419 KNPPPPKKXXXFFXPPPPXKKXXAXGGGGXPP 514
           + PPP  +   ++ PPPP       G GG  P
Sbjct: 35  QQPPPLVQQFYYYSPPPPSSPVGGGGTGGGGP 66


>09_02_0387 - 8375043-8375831,8376483-8376785,8414151-8414273
          Length = 404

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 117 PRNEFPGAVSGXPXFPKGLPPIXSGNNSPKXXPR 218
           P N+FP A +  P F    PP  +GN  P    R
Sbjct: 78  PHNDFPYAHAQFPLFSTQPPPAAAGNGGPTAASR 111


>01_05_0423 + 22032940-22033695
          Length = 251

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 426 PPPQKKXXXFFXPPPPP 476
           PPPQ +    F PPPPP
Sbjct: 170 PPPQGQQQLLFLPPPPP 186


>08_02_0758 +
           20848078-20849579,20849660-20849850,20849944-20850179,
           20850254-20850973
          Length = 882

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 417 KKTPPPQKKXXXFFXPPPPP 476
           +K PPP  K   +  PPPPP
Sbjct: 435 QKNPPPNLKGQCYGQPPPPP 454


>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 461 PPPPXKKXXAXGGGGXPP 514
           PPPP  +    GGGG PP
Sbjct: 3   PPPPPPQAGVAGGGGAPP 20


>05_03_0665 - 16774043-16774522
          Length = 159

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGG 504
           PPPP         PPP  ++ G  GGG
Sbjct: 71  PPPPLPPPPRLALPPPPGRRDGYLGGG 97



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 425 PPPPKKXXXFFXPPPPXKKXXAXGGGG 505
           PPPP+       PPPP ++    GGGG
Sbjct: 76  PPPPR----LALPPPPGRRDGYLGGGG 98


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 426 PPPQKKXXXFFXPPPPP 476
           PPPQ     F  PPPPP
Sbjct: 42  PPPQGAPPPFLAPPPPP 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,272,026
Number of Sequences: 37544
Number of extensions: 537559
Number of successful extensions: 1893
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)