Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_E03
         (916 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid...    31   5.8  
U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.                  31   5.8  
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ...    31   5.8  
BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.        31   5.8  
BC002875-1|AAH02875.2|  743|Homo sapiens PELP1 protein protein.        31   5.8  
AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HM...    31   5.8  
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.                 31   5.8  

>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
           rich nuclear protein isoform protein.
          Length = 1021

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
           PPPP         PPP     G  GGG PP
Sbjct: 725 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 754


>U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.
          Length = 1284

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424  PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
            PPPP         PPP     G  GGG PP
Sbjct: 988  PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 1017


>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
           leucine rich protein 1 protein.
          Length = 1130

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
           PPPP         PPP     G  GGG PP
Sbjct: 843 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 872


>BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.
          Length = 1048

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
           PPPP         PPP     G  GGG PP
Sbjct: 761 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 790


>BC002875-1|AAH02875.2|  743|Homo sapiens PELP1 protein protein.
          Length = 743

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
           PPPP         PPP     G  GGG PP
Sbjct: 456 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 485


>AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HMX3
           protein.
          Length = 1061

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
           PPPP         PPP     G  GGG PP
Sbjct: 774 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 803


>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
          Length = 1130

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +1

Query: 424 PPPPKKXXXXFFXPPPXQKKXGXXGGGXPP 513
           PPPP         PPP     G  GGG PP
Sbjct: 843 PPPPPPVPGPVTLPPPQLVPEGTPGGGGPP 872


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,495,752
Number of Sequences: 237096
Number of extensions: 2500570
Number of successful extensions: 6360
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4820
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)