Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_E02
(929 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 46 6e-05
09_06_0213 - 21610887-21611198 46 6e-05
09_04_0227 + 15861410-15861721 46 6e-05
07_03_0825 + 21773710-21774021 46 6e-05
05_05_0150 + 22758060-22758371 46 6e-05
05_05_0128 - 22591720-22592031 46 6e-05
04_04_0926 - 29462363-29462674 46 6e-05
03_01_0134 + 1060551-1060862 46 6e-05
02_05_0333 - 28012829-28013140 46 6e-05
01_06_1262 + 35833882-35834193 46 6e-05
05_05_0130 - 22598744-22599043,22599296-22599307 38 0.009
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 7.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 7.0
>10_08_0780 - 20500344-20500655
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>09_06_0213 - 21610887-21611198
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>09_04_0227 + 15861410-15861721
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>07_03_0825 + 21773710-21774021
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>05_05_0150 + 22758060-22758371
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>05_05_0128 - 22591720-22592031
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>04_04_0926 - 29462363-29462674
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>03_01_0134 + 1060551-1060862
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>02_05_0333 - 28012829-28013140
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>01_06_1262 + 35833882-35834193
Length = 103
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A+RKTVTAMDVVYALKRQGRTL
Sbjct: 77 ARRKTVTAMDVVYALKRQGRTL 98
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 38.3 bits (85), Expect = 0.009
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
A RKTV AMDVVYALK QGRT+
Sbjct: 77 AHRKTVMAMDVVYALKLQGRTI 98
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +2
Query: 626 PXPXPXXKTXXPXXXVXGNXXXXPPXGVXXXSPXTRGXXPXKXFXPXXXXGXXPXKXPPX 805
P P P P PP G P +G P P G P PP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKG-PPPPPPAKGPPP-----PPPPKGPSPPPPPPP 370
Query: 806 XXXXXXXPPPPXKKXQKTXPXXXG 877
PPPP K P G
Sbjct: 371 GGKKGGPPPPPPKGGASRPPAAPG 394
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 579 KXSPPPPGXRGXXFGPXFXFPXXKPXPXXXXXXGTGFXXPPXGXXXFPPXXGXXP 743
K PPPP +G P P P P G PP G PP P
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/98 (24%), Positives = 25/98 (25%), Gaps = 4/98 (4%)
Frame = +3
Query: 588 PPPPGXRGXXFGPXFXFPXXKPXPXXXXXXGTGFXXPPXGXXXFP----PXXGXXPRKXX 755
PPPP F P P P P + PP P P P
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPP 610
Query: 756 FXPXXXXXXXPXXGPXXLXFXXXXPPPPXKXXKKXXPN 869
P P P L PPPP PN
Sbjct: 611 ILPNRSVPPPPPP-PPPLPNHSVLPPPPPPPPPPSLPN 647
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 586 PPPPRGXGVXFLXPXSXSPXXNXXPXXXGXXEXXXPPPXGGXXXFPP 726
PPPPRG G P P P G PPP G PP
Sbjct: 1186 PPPPRGHGGVGGPPTP--PGAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,198,423
Number of Sequences: 37544
Number of extensions: 276759
Number of successful extensions: 524
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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