Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_E02
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical pr... 47 2e-05
X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein... 47 2e-05
U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protei... 47 2e-05
U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protei... 47 2e-05
U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein... 47 2e-05
U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein... 47 2e-05
U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein... 47 2e-05
AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone prote... 47 2e-05
AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone prote... 47 2e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.3
>Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical
protein T10C6.14 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.8 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.4 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical
protein ZK131.1 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical
protein F54E12.3 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical
protein T23D8.5 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical
protein B0035.9 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical
protein C50F4.7 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical
protein F22B3.1 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein
protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protein 5
protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protein
18 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein 28
protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein 60
protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein 38
protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone protein
31 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone protein
50 protein.
Length = 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 50 AKRKTVTAMDVVYALKRQGRTL 115
AKRKTVTAMDVVYALKRQGRTL
Sbjct: 77 AKRKTVTAMDVVYALKRQGRTL 98
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/82 (24%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +1
Query: 625 PXSXSPXXNXXPXXXGXXEXXXPPPXGG--XXXFPPHXGXXPXKXXFXXGXXRXPTPKXA 798
P S +P P G PPP G PP G P P +
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 799 PXXLXFXXXPPPPXXKXXKNXP 864
P + PPPP + P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMP 348
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +2
Query: 695 PPXGVXXXSPXTRGXXPX---KXFXPXXXXGXXPXKXPPXXXXXXXXPPPPXKKXQKTXP 865
PP G P G P F P G P PP PPPP + P
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP-PPGMRYPGGMPPPPPPRYPSAGP 360
Query: 866 XXXGXXPP 889
PP
Sbjct: 361 GMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/82 (24%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +1
Query: 625 PXSXSPXXNXXPXXXGXXEXXXPPPXGG--XXXFPPHXGXXPXKXXFXXGXXRXPTPKXA 798
P S +P P G PPP G PP G P P +
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 799 PXXLXFXXXPPPPXXKXXKNXP 864
P + PPPP + P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMP 358
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +2
Query: 695 PPXGVXXXSPXTRGXXPX---KXFXPXXXXGXXPXKXPPXXXXXXXXPPPPXKKXQKTXP 865
PP G P G P F P G P PP PPPP + P
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP-PPGMRYPGGMPPPPPPRYPSAGP 370
Query: 866 XXXGXXPP 889
PP
Sbjct: 371 GMYPPPPP 378
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +1
Query: 586 PPPPRGXGVXFLXPXSXSPXXNXXPXXXGXXEXXXPPPXGGXXXFPPHXGXXPXKXXFXX 765
PPPP G P P P G PPP GG PP P F
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPPPPP----PPPPGGFKG 782
Query: 766 GXXRXPTP 789
G P P
Sbjct: 783 GPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +1
Query: 586 PPPPRGXGVXFLXPXSXSPXXNXXPXXXGXXEXXXPPPXGGXXXFPPHXGXXPXKXXFXX 765
PPPP G P P P G PPP GG PP P F
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPPPPP----PPPPGGFKG 782
Query: 766 GXXRXPTP 789
G P P
Sbjct: 783 GPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +1
Query: 586 PPPPRGXGVXFLXPXSXSPXXNXXPXXXGXXEXXXPPPXGGXXXFPPHXGXXPXKXXFXX 765
PPPP G P P P G PPP GG PP P F
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPPPPP----PPPPGGFKG 365
Query: 766 GXXRXPTP 789
G P P
Sbjct: 366 GPPPPPPP 373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,371,993
Number of Sequences: 27780
Number of extensions: 189786
Number of successful extensions: 376
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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