Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D23
         (919 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    31   2.2  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    31   2.2  
BT021222-1|AAX33370.1|  822|Drosophila melanogaster RH55640p pro...    29   6.8  
AE014134-2947|AAF53680.2|  822|Drosophila melanogaster CG10333-P...    29   6.8  

>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 827 PPPPXGGXFFXXXXXPPPPP 768
           PPPP GG        PPPPP
Sbjct: 226 PPPPAGGVLVMPRPPPPPPP 245


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 827 PPPPXGGXFFXXXXXPPPPP 768
           PPPP GG        PPPPP
Sbjct: 226 PPPPAGGVLVMPRPPPPPPP 245


>BT021222-1|AAX33370.1|  822|Drosophila melanogaster RH55640p
           protein.
          Length = 822

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 563 RXXGGGXXXGGGGXXPXKKKXXXGXGPP 646
           R  GGG   GGGG    K K   G  PP
Sbjct: 79  RERGGGAGGGGGGGAEKKAKMDTGDAPP 106


>AE014134-2947|AAF53680.2|  822|Drosophila melanogaster CG10333-PA
           protein.
          Length = 822

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 563 RXXGGGXXXGGGGXXPXKKKXXXGXGPP 646
           R  GGG   GGGG    K K   G  PP
Sbjct: 79  RERGGGAGGGGGGGAEKKAKMDTGDAPP 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,984,455
Number of Sequences: 53049
Number of extensions: 700377
Number of successful extensions: 5521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5081
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)