Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_D19
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.37
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.64
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 30 2.6
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 30 2.6
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 4.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 6.0
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 7.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 7.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 7.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 7.9
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 603 GXVKNPPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
G + PP GG P PP + PP P PPPPPP
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF--GAPPPPPPP 120
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 612 KNPPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPP 752
K PP G P F PP F PP P PPPPP
Sbjct: 44 KQAPPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPG--PGGIPPPPP 88
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
PPP GG P P PP P K PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
PPP GG P P PP P K PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
PPP GG P P PP P K PPPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 681 PXXLKIFXPPXPXXKKNXXPPPPPP 755
P +K+ P P K+ PPPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPPPP 313
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 705 PPXPXXKKNXXPPPPPP 755
PP P +++ PPPPPP
Sbjct: 298 PPPPIKEESPPPPPPPP 314
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 681 PXXLKIFXPPXPXXKKNXXPPPPPP 755
P +K+ P P K+ PPPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPPPP 313
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 705 PPXPXXKKNXXPPPPPP 755
PP P +++ PPPPPP
Sbjct: 298 PPPPIKEESPPPPPPPP 314
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 815 GGGXFFXGGXKKXXXXXGXXXGGRGGVXVFFXXGGGXXKN 696
GGG GG G GGRGG F GGG N
Sbjct: 99 GGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGN 138
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 705 PPXPXXKKNXXPPPPPP 755
PP P N PPPPPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 680 PXXXKNFSPXXPPXKKKXXPPPAPP 754
P ++FSP PP + + PP PP
Sbjct: 1063 PPQPRDFSPPQPPQQSRMFPPSQPP 1087
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 813 GGXFFXGGXKKKXXXXGXXXGGAGGGXXFFFXGGXXG 703
GG F GG + GG+GGG F GG G
Sbjct: 826 GGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGGG 862
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 825 FFXGGGXFFXGGXKKKXXXXGXXXGGAGGGXXFFFXGG 712
F G G F GG G GG GGG F GG
Sbjct: 66 FGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGG 103
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
PPP GG P PP PP P PPPPPP
Sbjct: 219 PPPIGGIAPVNAHGAP----PP-------PPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
PPP GG P PP PP P PPPPPP
Sbjct: 205 PPPIGGIAPVNAHGAP----PP-------PPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PPPXGGFXPXXKXXXXCF*XPPXXLKIFXPPXPXXKKNXXPPPPPP 755
PPP GG P PP PP P PPPPPP
Sbjct: 205 PPPIGGIAPVNAHGAP----PP-------PPLPPVGAGAPPPPPPP 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,190,730
Number of Sequences: 27780
Number of extensions: 230094
Number of successful extensions: 1766
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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