Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D12
         (946 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p pro...    29   7.0  
AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA...    29   7.0  

>AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p
           protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 25/81 (30%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
 Frame = +3

Query: 657 FPXPRSMTPCPRSFGWGNGISSXKGGNTVXPKIXGIPREKTFXPK---GPXXGPXTXKRP 827
           F  P    P P   GW  G     GGN   P    +  +  F P    G   GP     P
Sbjct: 101 FAPPNRQQPTPP--GWPPGWQWGAGGNQNQPGFDWV--QTGFAPGWNGGGGQGPG-WNGP 155

Query: 828 GWXXFXQRXPPPXXXFXKXXP 890
           GW     R PPP   F    P
Sbjct: 156 GWNGGGGRGPPPRPGFNGGGP 176


>AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA
           protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 25/81 (30%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
 Frame = +3

Query: 657 FPXPRSMTPCPRSFGWGNGISSXKGGNTVXPKIXGIPREKTFXPK---GPXXGPXTXKRP 827
           F  P    P P   GW  G     GGN   P    +  +  F P    G   GP     P
Sbjct: 101 FAPPNRQQPTPP--GWPPGWQWGAGGNQNQPGFDWV--QTGFAPGWNGGGGQGPG-WNGP 155

Query: 828 GWXXFXQRXPPPXXXFXKXXP 890
           GW     R PPP   F    P
Sbjct: 156 GWNGGGGRGPPPRPGFNGGGP 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,848,397
Number of Sequences: 53049
Number of extensions: 660579
Number of successful extensions: 1301
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)