Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D11
         (930 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    26   1.9  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.5  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    25   3.3  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 234 YMQKRIIRTLITNFGNACVWKVFFYLQKCLSGSIW*LNG*MNTHLCKKM 380
           Y  K  I+TL    G+  VW  FF+     +G ++ +NG +N+   +K+
Sbjct: 167 YHPKNTIKTLSHGGGHVMVWGCFFWHG---TGPLFRINGTLNSEGYRKI 212


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 338 VAEWLNEYTSLQENEVRSFAAEHEHNH-EIATA 433
           V +WL +    QE++       H H+H E+ TA
Sbjct: 636 VEKWLQQEEQQQEDDHHHHQQHHHHHHAEVTTA 668


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -1

Query: 405 CSAAKLRTSFSCKDVYSFSHSATRCFHSDISVDKRRLSKHK 283
           C    L     C   Y + H+A RC   D S    R ++ K
Sbjct: 203 CRLRLLERRRQCYRCYEYGHTAARCHGKDRSSKCHRCAEDK 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,426
Number of Sequences: 2352
Number of extensions: 16380
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)