Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D11
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040641-4|AAB94945.1|  451|Caenorhabditis elegans Hypothetical ...    68   8e-12
AF040641-3|AAT81205.1|  509|Caenorhabditis elegans Hypothetical ...    68   8e-12
Z81130-10|CAB03418.1|  653|Caenorhabditis elegans Hypothetical p...    32   0.67 
Z81130-9|CAI70413.1|  616|Caenorhabditis elegans Hypothetical pr...    32   0.67 
U64601-2|AAQ82847.1|  592|Caenorhabditis elegans Temporarily ass...    31   1.6  
AF016666-7|AAB66087.1|  196|Caenorhabditis elegans Hypothetical ...    30   2.7  
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>AF040641-4|AAB94945.1|  451|Caenorhabditis elegans Hypothetical
           protein D1069.3a protein.
          Length = 451

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = +2

Query: 506 VQILENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLSSVAQGKKKTYRCIETLLIGIY 685
           V +++++  Q+ S Y  KE  L+ + LQF+P  +  YL ++++ + K+    ET LI IY
Sbjct: 59  VDLIQSIIGQILSIYY-KEGVLRLYALQFVPGFVSLYLLALSKKQHKSISLFETFLIAIY 117

Query: 686 NFEVVD--ENGKPKVVSFRLPSLAQSSIYHEPLSLR 787
           N E+VD  E+ + K+   R+PS+   S+YH+P  ++
Sbjct: 118 NEEIVDGSESNEKKMEDIRIPSIRHHSVYHDPAKIQ 153


>AF040641-3|AAT81205.1|  509|Caenorhabditis elegans Hypothetical
           protein D1069.3b protein.
          Length = 509

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = +2

Query: 506 VQILENVCTQLFSFYRSKEIQLQRFTLQFIPTLIYNYLSSVAQGKKKTYRCIETLLIGIY 685
           V +++++  Q+ S Y  KE  L+ + LQF+P  +  YL ++++ + K+    ET LI IY
Sbjct: 59  VDLIQSIIGQILSIYY-KEGVLRLYALQFVPGFVSLYLLALSKKQHKSISLFETFLIAIY 117

Query: 686 NFEVVD--ENGKPKVVSFRLPSLAQSSIYHEPLSLR 787
           N E+VD  E+ + K+   R+PS+   S+YH+P  ++
Sbjct: 118 NEEIVDGSESNEKKMEDIRIPSIRHHSVYHDPAKIQ 153


>Z81130-10|CAB03418.1|  653|Caenorhabditis elegans Hypothetical
           protein T23G11.6a protein.
          Length = 653

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
 Frame = +2

Query: 479 CELENDAQLVQILENVCTQLFSFYRSKEIQLQRFT----LQFIPTLIYNYLSSVAQGKKK 646
           C L+     V  LEN+ T +FS  +   + + +F     L ++  +  N+++S+ +   +
Sbjct: 145 CNLQTIPPSVDSLENLETVVFSNNKLDSLGVDQFKNKKQLSYLD-VSGNFITSIEEKAFE 203

Query: 647 TYRCIETLLIGIYNF---EVVDENGKPKVV 727
               +ETL+IG +NF    VV+E G+ K +
Sbjct: 204 PLTSLETLVIGEHNFINETVVEEIGRLKAL 233


>Z81130-9|CAI70413.1|  616|Caenorhabditis elegans Hypothetical
           protein T23G11.6b protein.
          Length = 616

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
 Frame = +2

Query: 479 CELENDAQLVQILENVCTQLFSFYRSKEIQLQRFT----LQFIPTLIYNYLSSVAQGKKK 646
           C L+     V  LEN+ T +FS  +   + + +F     L ++  +  N+++S+ +   +
Sbjct: 145 CNLQTIPPSVDSLENLETVVFSNNKLDSLGVDQFKNKKQLSYLD-VSGNFITSIEEKAFE 203

Query: 647 TYRCIETLLIGIYNF---EVVDENGKPKVV 727
               +ETL+IG +NF    VV+E G+ K +
Sbjct: 204 PLTSLETLVIGEHNFINETVVEEIGRLKAL 233


>U64601-2|AAQ82847.1|  592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 126, isoform b protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 267 TNFGNACVWKVFFYLQKCLSGSIW 338
           ++F +   W VF Y+Q  L GS+W
Sbjct: 14  SDFESIMAWSVFIYIQAALGGSLW 37


>AF016666-7|AAB66087.1|  196|Caenorhabditis elegans Hypothetical
           protein B0281.1 protein.
          Length = 196

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 667 CFYAPICFFFTLCHRAQIIIYKSGNE 590
           CF  PI F  +LC + +I  Y S NE
Sbjct: 51  CFLVPIAFHMSLCPKREISNYLSANE 76


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 332 HLVAEWLNEYTSLQENEVRSFAAEHEHNHEIATAIFNLFYCEDETV 469
           HL  E  +EYT +   +VR     H + H +   +  +F+  D TV
Sbjct: 161 HLTTELNDEYTVIPVIDVRLHPITHHYPHTLGVCLQPIFFFTDWTV 206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,012,797
Number of Sequences: 27780
Number of extensions: 395009
Number of successful extensions: 963
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)