Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D09
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ...    31   7.3  
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.     31   7.3  
BC051828-1|AAH51828.1|  812|Homo sapiens cyclic AMP-regulated ph...    30   9.7  
BC036399-1|AAH36399.1|  793|Homo sapiens ARPP-21 protein protein.      30   9.7  

>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
           actin protein.
          Length = 2266

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +1

Query: 265 YQELRPAHARDMQPYAHLDDALFKPPTPGAASTDGVYLRRSPELSPSPER 414
           YQELR     ++ PY  L      P  P +AST G      P L P P+R
Sbjct: 37  YQELRSPSGAEV-PYCDLPRCPPAPEDPLSASTSGCQSVVDPGLRPGPKR 85


>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
          Length = 2365

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +1

Query: 265 YQELRPAHARDMQPYAHLDDALFKPPTPGAASTDGVYLRRSPELSPSPER 414
           YQELR     ++ PY  L      P  P +AST G      P L P P+R
Sbjct: 37  YQELRSPSGAEV-PYCDLPRCPPAPEDPLSASTSGCQSVVDPGLRPGPKR 85


>BC051828-1|AAH51828.1|  812|Homo sapiens cyclic AMP-regulated
           phosphoprotein, 21 kD protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +1

Query: 301 QPYAHLDD--ALFKPPT---PGAASTDGVYLRRSPELSPSPERRDDYRPPAP 441
           QP+ + D   A++ PPT   P  ++  G   ++ P+  PSP+ +   +PP P
Sbjct: 488 QPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQP 539


>BC036399-1|AAH36399.1|  793|Homo sapiens ARPP-21 protein protein.
          Length = 793

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +1

Query: 301 QPYAHLDD--ALFKPPT---PGAASTDGVYLRRSPELSPSPERRDDYRPPAP 441
           QP+ + D   A++ PPT   P  ++  G   ++ P+  PSP+ +   +PP P
Sbjct: 434 QPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQP 485


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.133    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,010,796
Number of Sequences: 237096
Number of extensions: 1803067
Number of successful extensions: 5734
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5717
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)