Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D08
         (974 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           29   4.2  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   7.4  
03_02_0328 - 7487759-7488340                                           28   9.8  
03_01_0515 - 3864796-3865425                                           28   9.8  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 790 PFPPSSPXFXSXPWXSPPXQXPXNPGGPSXXXPP 891
           P PP  P     P   PP   P  PGGP     P
Sbjct: 201 PPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRP 234


>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = +1

Query: 742  PRPXXYAXLXNXXXLXPFPPSSPXFXSXPWXSPPXQXPXNPGGPSXXXPP 891
            P P   A       L P PP  P     P   PP   P  PGGP    PP
Sbjct: 904  PPPAPSATANTASALSP-PPPRP-----PGAPPPPPPPGKPGGPPPPPPP 947


>03_02_0328 - 7487759-7488340
          Length = 193

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 772 NXXXLXPFPPSSPXFXSXPWXSPPXQXP 855
           N   L P PP++  + + P+  PP Q P
Sbjct: 39  NQPPLLPLPPAATKYATFPYPPPPQQPP 66


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/53 (28%), Positives = 19/53 (35%)
 Frame = +1

Query: 733 PFXPRPXXYAXLXNXXXLXPFPPSSPXFXSXPWXSPPXQXPXNPGGPSXXXPP 891
           P  P P     + +     P PP  P   + P   PP   P +P   S   PP
Sbjct: 68  PLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,781,442
Number of Sequences: 37544
Number of extensions: 172295
Number of successful extensions: 366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)